Deciphering aging-associated prognosis and heterogeneity in gastric cancer through a machine learning-driven approach.

Journal: iScience
Published Date:

Abstract

Gastric cancer (GC) is a prevalent malignancy with a high mortality rate and limited treatment options. Aging significantly contributes to tumor progression, and GC was confirmed as an aging-related heterogeneous disease. This study established an aging-associated index (AAI) using a machine learning-derived gene panel to stratify GC patients. High AAI scores associated with poor prognosis and indicated potential benefits from adjuvant chemotherapy, while showing resistance to immunotherapy. Single-cell transcriptome analysis revealed that AAI was enriched in monocyte cells within the tumor microenvironment. Two distinct molecular subtypes of GC were identified through unsupervised clustering, leading to the development of a subtype-specific regulatory network highlighting and as potential therapeutic targets. Drug sensitivity analyses indicated that patients with high expression may respond to FDA-approved drugs (axitinib, dacarbazine, crizotinib, and vincristine). Finally, a user-friendly Shiny application was created to facilitate access to the prognostic model and molecular subtype classifier for GC.

Authors

  • Jiang Li
  • Chuanlai Yang
    Department of Science and Technology, The Second Affiliated Hospital of Soochow University, Soochow, China.
  • Yunxiao Zhang
    Clinical Big Data Research Center, The Seventh Affiliated Hospital, Sun Yat-Sen University, Shenzhen, China.
  • Xiaoning Hong
    Clinical Big Data Research Center, The Seventh Affiliated Hospital, Sun Yat-Sen University, Shenzhen, China.
  • Mingye Jiang
    Clinical Big Data Research Center, The Seventh Affiliated Hospital, Sun Yat-Sen University, Shenzhen, China.
  • Zhongxu Zhu
    Biomics Center, Hangzhou Institute of Medicine (HIM), Chinese Academy of Sciences, Hangzhou, China.

Keywords

No keywords available for this article.