Dopaminergic signalling is central to value learning and decision making. It has been observed that multiple pathways with different patterns of connectivity project to midbrain dopaminergic neurons, some involving direct excitatory projections while... read more
Machine learning is increasingly applied to species-level biological data, but phylogenetic autocorrelation can make evaluation species statistically non-independent, violating the assumption of independence in model evaluation and potentially leadin... read more
Background Root competence, the ability of soil bacteria to establish and grow on plant roots, is a key ecological trait influencing plant nutrition, growth, and health. However, identifying genomic determinants of root competence across bacteria rem... read more
Accurate mapping of the Arabidopsis thaliana protein-protein interaction (PPI) network is essential for deciphering complexity of plant systems biology. Here, we present ARACoFusion, a specialized deep learning architecture designed to predict inter-... read more
Multi-omics integration, the joint analysis of two or more high-dimensional molecular data types collected on the same biological samples, is now a standard analytical approach across nutrigenomics, toxicogenomics, microbiome research, and disease ge... read more
Peptide therapeutics are increasingly used to treat challenging diseases, but immunogenicity risks limit their clinical success. In silico tools enable immunogenicity screening through prediction of peptide-MHCII binding, yet current methods fail to ... read more
Recent advances in artificial intelligence (AI) have raised interest in its potential to similarly progress biological psychiatry. This study investigates the current utility of AI models in predicting psychiatric phenotypes in youth - a critical win... read more
T-lineage acute lymphoblastic leukemia (T-ALL) is an aggressive pediatric malignancy characterized by complex heterogeneity across multiple molecular layers. Accurate subtyping is essential for understanding disease mechanisms, risk stratification, a... read more
The inflammatory decidual reaction renders the cycling endometrium transiently permissive for embryo implantation before transforming it into the decidua, the maternal bed accommodating the fetal placenta during pregnancy. Disruptions in decidual tis... read more
Gastrointestinal stromal tumors (GISTs) are the most common mesenchymal neoplasms of the gastrointestinal tract, yet GIST-specific omics evidence remains scattered across small cohorts and is not represented as a dedicated disease project in major ca... read more
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