While children with suicidal ideation or non-suicidal self-injury (NSSI) are at high risk of suicide, most do not attempt suicide. This study aims to identify predictors of first suicide attempts among children with suicidal thoughts or NSSI. We util... read more
Sleep posture is known to be relevant to various sleep disorders, such as sleep apnea, but it is not often quantified in sleep monitoring systems. We address this with a novel vision-based approach, which is robust to the challenging conditions (vari... read more
This study explores integrating machine learning into electronic medical record systems to predict stability of inpatient lab tests. A 'SmartAlert' system was developed and tested at Stanford Hospital. The system identifies stable lab results, advisi... read more
Kawasaki disease (KD) is a systemic vasculitis in young children, and early diagnosis remains challenging when clinical features are incomplete or overlap with those of other febrile illnesses. Because electrocardiography (ECG) is noninvasive and wid... read more
This paper presents a six-stage methodological framework for Convolutional Neural Network (CNN)-based cetacean vocalization detection and classification in Passive Acoustic Monitoring (PAM), implemented as the open-source toolkit ai-pam-pipeline. The... read more
Inferring tumor molecular phenotypes from high-dimensional multi-omic data is a fundamental challenge in computational biology. Current methods for estimating tumor cell-specific total mRNA expression (TmS) require matched DNA and RNA sequencing data... read more
Background and Objectives: Electrical stimulation mapping (ESM) is the clinical gold standard for identifying eloquent cortex during presurgical evaluation but is time-intensive, constrained by incomplete cortical sampling, and limited by patient tol... read more
Post-translational modifications (PTMs) on proteins dynamically regulate their functions and subsequently cellular physiology. Significant advances have been made in their detection and modeling: mass spectrometry-based proteomics has become the corn... read more
Self-supervised pretraining has become central to biological machine learning, yet microbiome data remains comparatively underexplored in terms of both modeling approaches and evaluation frameworks. To address this gap, we present Atlas, a pretrainin... read more
The rapid advancement of genome sequencing technologies has led to the accumulation of a vast number of protein sequences in public databases. However, a significant proportion of these proteins remain functionally uncharacterized. Concurrently, the ... read more
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