Multimodal learning has the potential to improve clinical prediction by integrating complementary data sources, but the incremental value of imaging beyond structured electronic health record (EHR) data remains unclear in real-world settings. We deve... read more
Planarian flatworms represent one of the most evolutionarily informative nervous systems for an account of ancient bilaterian brains. Likewise, the unparalleled regenerative ability of planarians makes possible certain investigations of neural develo... read more
The voltage-gated potassium channel hERG (Kv11.1) plays a central role in cardiac repolarisation by mediating the rapid delayed rectifier K current (IKr). Blockage of hERG by small molecules can lead to delayed repolarisation, QT interval prolongatio... read more
Spatial omics technologies have revolutionized the molecular profiling of tissues but remain constrained by high costs and limited scalability. While hematoxylin and eosin (H&E) staining is ubiquitous, it lacks molecular specificity. Here, we present... read more
Spatial omics technologies have advanced to single-cell resolution, enabling systematic analysis of tissue microenvironments alongside cellular-state heterogeneity. However, computationally defining microenvironmental states at single-cell resolution... read more
Interpreting high-dimensional single-cell transcriptomic data remains challenging, as existing methods rely on latent representations or prior knowledge that require extensive post hoc analysis to derive biologically meaningful insights. Topic models... read more
Tumor-infiltrating lymphocytes are essential for anti-tumor immunity, yet distinguishing tumor-reactive T cells from non-reactive bystander cells remains a significant challenge. Existing signatures, often derived from single cohorts, lack robustness... read more
Protein-peptide interactions are important mediators of diverse biological processes. While deep learning has revolutionized protein structure prediction, comparative evaluation of these methods, specifically for protein-peptide complexes, remains an... read more
Despite decades of progress in computational drug discovery, deep learning-based molecular representation models remain largely structure-centric, assuming that chemical similarity approximates functional similarity. However, drug effects in cells ar... read more
In the treatment of high grade serous ovarian cancer (HGSC), patients initially diagnosed with unresectable tumors are first treated with neoadjuvant chemotherapy (NACT) to reduce tumor burden prior to surgery. Analysis of matched pre- and post- NACT... read more
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