tRNA are adapter molecules with an integral role in translation and further roles in stress adaptation. Processing of tRNA is tightly regulated and includes the enzymatic addition of several post-transcriptional modifications that are required for tr... read more
Any process that generates information at a constant rate into a branching hierarchy faces a geometric packing problem: the number of distinguishable lineages grows exponentially, but Euclidean space grows only polynomially. We show that this tension... read more
Background: Pediatric dilated cardiomyopathy (DCM) is a rare, progressive heart disease with variable outcomes that range from recovery to heart transplantation. To date, there are no prognostic biomarkers for children with DCM. Identifying circulati... read more
The advent of artificial intelligence (AI) has brought revolutionary tools for biomedical transcriptomic (RNA-level) research. However, there are persistent constraints including limited interpretations with biomedical concepts such as functional pat... read more
Recent advancements in histopathology foundation models (FMs) have largely been driven by scaling the training data, often utilizing massive proprietary datasets. However, the long-tailed distribution of morphological features in whole-slide images (... read more
Virtual cell models aim to enable in silico experimentation by predicting how cells respond to genetic, chemical, or cytokine perturbations from single-cell measurements. In practice, however, large-scale perturbation prediction remains constrained b... read more
AI-based molecular dynamics simulation brings ab initio calculations to biomolecules in an efficient way, in which the machine learning force field (MLFF) locates at the central position by accurately predicting the molecular energies and forces. Mos... read more
Messenger RNA (mRNA) vaccines offer promising therapeutics for combating various diseases, yet their inherent chemical instability hampers their long-term efficacy. Although several methods have been developed to predict mRNA degradation, they exhibi... read more
Frailty is a prevalent geriatric syndrome, and the shortage of objective biomarkers restricts its early diagnosis and intervention. This study aimed to identify robust molecular signatures and diagnostic markers for frailty using bioinformatics analy... read more
A mean field model (MFM) is a mesoscopic description of neuronal population dynamics that can reduce the complexity of neural microcircuits into equations preserving key functional properties. The generation of a MFM is a complex mathematical process... read more
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