AI-Enabled Diagnostic Prediction within Electronic Health Records to Enhance Biosurveillance and Early Outbreak Detection.

Journal: medRxiv : the preprint server for health sciences
Published Date:

Abstract

Detecting infectious disease outbreaks promptly is crucial for effective public health responses, minimizing transmission, and enabling critical interventions. This study introduces a method that integrates machine learning (ML)-based diagnostic predictions with traditional epidemiological surveillance to enhance biosurveillance systems. Using 4.5 million patient records from 2010 to 2022, ML models were trained to predict, within 24-hour intervals, the likelihood of patients being diagnosed with infectious or unspecified gastrointestinal, respiratory, or neurological diseases. High-confidence predictions were combined with final diagnoses and analyzed using spatiotemporal outbreak detection techniques. Among diseases with five or more outbreaks between 2014 and 2022, 33.3% (41 of 123 outbreaks) were detected earlier, with lead times ranging from 1 to 24 days and an average of 1.33 false positive outbreaks detected annually. This approach demonstrates the potential of integrating ML with conventional methods for faster outbreak detection, provided adequate disease-specific training data is available.

Authors

  • Andre R Goncalves
    Computational Engineering Division, Engineering Directorate, Lawrence Livermore National Laboratory.
  • Jose Cadena Pico
    Computational Engineering Division, Engineering Directorate, Lawrence Livermore National Laboratory.
  • Yeping Hu
    Lawrence Livermore National Laboratory, Livermore, CA, United States.
  • David Schlessinger
    Laboratory of Genetics and Genomics, National Institute on Aging, Baltimore, MD 21224, USA.
  • John Greene
    Division of Research, Kaiser Permanente Northern California.
  • Liam O'suilleabhain
    Division of Research, Kaiser Permanente Northern California.
  • Heather Clancy
    Division of Research, Kaiser Permanente Northern California.
  • Michael Vollmer
    Division of Research, Kaiser Permanente Northern California.
  • Vincent Liu
    Department of Medicine, Oregon Health & Science University, 3181 S.W. Sam Jackson Park Road, Mail Code UHN67, Portland, OR, 97239-3098, USA.
  • Tom Bates
    Computational Engineering Division, Engineering Directorate, Lawrence Livermore National Laboratory.
  • Priyadip Ray
    Lawrence Livermore National Laboratory, 7000 East Ave, Livermore, CA, USA.

Keywords

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