Knowledge-Driven Graph Representation Learning for Myocardial Infarction Localization.

Journal: IEEE journal of biomedical and health informatics
Published Date:

Abstract

The electrocardiogram (ECG) serves as a crucial tool for myocardial infarction (MI) localization, and deep learning methods have proven effective in assisting physicians with MI localization. Traditional MI localization methods are purely data-driven, and the quality of the data significantly affects the model's performance, particularly in the localization of rare MI. We propose a knowledgedriven graph representation learning (KD-GRL) framework which is designed to guide deep learning models in identifying key features for MI localization using prior knowledge. The MI localization knowledge graph (KG) is constructed by integrating medical knowledge about MI localization, including ECG leads and morphological manifestations, the correlations between MI localization labels, diagnostic rules, and patient demographic information. KG effectively represents the relationships among various entities, which include ECG signal entities, morphological feature entities, and demographic feature entities. The embeddings of these entities are obtained using parallel patient multi-feature extractors. Additionally, a KG aggregation method based on edge relation projection (ERP) is proposed to aggregate the relational information in the MI localization KG. Ultimately, the MI localization task is transformed into a link prediction task between patient entity and localization label entities within the KG. We conduct experiments on two public datasets, PTB and PTBXL, achieving F1-scores of 48.90% and 46.06%, respectively, both surpassing the comparison methods. Additionally, due to the incorporation of diagnostic knowledge, our method outperforms the comparison methods in localizing rare MIs.

Authors

  • Fengyi Guo
    School of Artificial Intelligence and Computer Science, Jiangnan University, 1800 Lihu Avenue, Binhu District, Wuxi, Jiangsu 214122, China.
  • Ying An
  • Hulin Kuang
    From the Calgary Stroke Program, Departments of Clinical Neurosciences (W.Q., H.K., E.T., J.M.O., M.G., M.D.H., A.M.D., B.K.M.), Radiology (M.G., M.D.H., A.M.D., B.K.M.), and Community Health Sciences (M.D.H., B.K.M.), University of Calgary, 239 Strathridge Pl SW, Calgary, AB, Canada T3H 4J2; Hotchkiss Brain Institute, Calgary, Alberta, Canada (M.G., M.D.H., A.M.D., B.K.M.), Department of Neurology, Keimyung University, Daegu, South Korea (S.I.S.); and Division of Neuroradiology, Clinic of Radiology and Nuclear Medicine, University Hospital Basel, University of Basel, Basel, Switzerland (J.M.O.).
  • Jianxin Wang

Keywords

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