Bifunctional Phyto-Synthesized Nano Silver for Mitigating Salinity-Induced Dormancy and Associated Fungal Infections During Seed Germination in Brassica juncea with Integration of Machine Learning-Based Predictive Modeling.

Journal: Applied biochemistry and biotechnology
Published Date:

Abstract

Salinity-induced dormancy associated with fungal infection during germination in plants is the major contributor to abiotic and biotic stress, leading to a loss in crop productivity. The present study has been designed to evaluate the dual functions of Cymbopogon citratus-derived silver nanoparticles (CC-AgNPs) for enhancing the germination and prevention of Aspergillus niger (ATCC 6275) infection in seeds of Brassica juncea. AgNPs were synthesized using the cell-free aqueous extract of C. citratus followed by their characterization using LC-MS at variable voltage for trace level detection of compounds responsible for bio-reduction. The extract contained metabolites belonging to alkaloids, flavonoids, amino acid, and saponins. UV-Vis spectra revealed AgNP synthesis with a peak at 430 nm and stability for up to 180 days. Additionally, FTIR peaks demonstrated the presence of capped bioactive as reducing and stabilizing agents. TEM analysis depicted an AgNP size of 33 nm and spherical. Salt-stressed B. juncea seeds were primed with 100 ppm of CC-AgNPs, which significantly increased the germination rates and total seedling growth. This has been mainly favored by the restoration of proteins involved in germination, the antioxidant potential of green nano-silver, along with ameliorating amylase activity (15.53 ± 0.3 mg g fresh weight min) for increasing soluble sugars (15.37 ± 0.3 mg g fresh weight) to support the germination process. Furthermore, CC-AgNPs showed antifungal activity against A. niger as demonstrated by radial growth inhibition assay. Machine learning models, including Extra Trees, CatBoost, XGBoost, and Ensemble Averaging, have also been employed to predict seedling growth performance under AgNP treatment, enhancing the predictive and analytical strength of the study. Molecular docking results revealed that Ag in CC-AgNPs collectively mediate the antifungal activity by interacting with specific domains of fungal protein chitin deacetylase. Also, these CC-AgNPs are safe to use, as examined by biocompatibility assays on soil microbiota, human RBCs, and human skin fibroblast cell lines. The results herein prospect the employment of phyto-synthesized AgNPs for nanospray applications in the field, mitigating not only the salt-induced seed dormancy but also battling fungal infections during seed germination.

Authors

  • Krish Thakkar
    Department of Biotechnology, Parul Institute of Technology, Parul University, Vadodara, 391760, Gujarat, India.
  • Vaibhav Singh
    Department of Life Science, Parul Institute of Applied Science, Parul University, Vadodara, 391760, Gujarat, India.
  • Prashant Sharma
    Department of Hematology, Postgraduate Institute of Medical Education and Research, Chandigarh 160012, India.
  • Prince Jain
    Department of Mechatronics Engineering, Parul Institute of Technology, Parul University, Vadodara, Gujarat, India.
  • Anupam Jyoti
    Department of Life Science, Parul Institute of Applied Science, Parul University, Vadodara, 391760, Gujarat, India.
  • Ashwani Kumar
    Studio of Computational Biology & Bioinformatics, The Himalayan Centre for High-throughput Computational Biology, (HiCHiCoB, A BIC supported by DBT, India)CSIR-Institute of Himalayan Bioresource Technology (CSIR-IHBT), Palampur (HP), India.
  • Saurabhkumar Mehta
    Department of Life Science, Parul Institute of Applied Science, Parul University, Vadodara, 391760, Gujarat, India.
  • Abhijeet Singh
    Cancer Research Laboratory, Department of Biosciences, Manipal University Jaipur, 303007, Jaipur, Rajasthan, India.
  • Manish Singh
    Chemical Biology Unit, Institute of Nano Science and Technology (INST), Knowledge City, Sector-81, Mohali, 140306, Punjab, India. manish@inst.ac.in.
  • Juhi Saxena
    Department of Biotechnology, Parul Institute of Technology, Parul University, Vadodara, 391760, Gujarat, India. jina.saxena@gmail.com.

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