Automatic Choroid Segmentation and Thickness Measurement Based on Mixed Attention-guided Multiscale Feature Fusion Network.

Journal: IEEE transactions on medical imaging
Published Date:

Abstract

Choroidal thickness variations serve as critical biomarkers for numerous ophthalmic diseases. Accurate segmentation and quantification of the choroid in optical coherence tomography (OCT) images is essential for clinical diagnosis and disease progression monitoring. Due to the small number of disease types in the public OCT dataset involving changes in choroidal thickness and the lack of a publicly available labeled dataset, we constructed the Xuzhou Municipal Hospital (XZMH)-Choroid dataset. This dataset contains annotated OCT images of normal and eight choroid-related diseases. However, segmentation of the choroid in OCT images remains a formidable challenge due to the confounding factors of blurred boundaries, non-uniform texture, and lesions. To overcome these challenges, we proposed a mixed attention-guided multiscale feature fusion network (MAMFF-Net). This network integrates a Mixed Attention Encoder (MAE) for enhanced fine-grained feature extraction, a deformable multiscale feature fusion path (DMFFP) for adaptive feature integration across lesion deformations, and a multiscale pyramid layer aggregation (MPLA) module for improved contextual representation learning. Through comparative experiments with other deep learning methods, we found that the MAMFF-Net model has better segmentation performance than other deep learning methods (mDice: 97.44, mIoU: 95.11, mAcc: 97.71). Based on the choroidal segmentation implemented in MAMFF-Net, an algorithm for automated choroidal thickness measurement was developed, and the automated measurement results approached the level of senior specialists.

Authors

  • Xiaoyu Zhu
    Key Laboratory of Environmental and Applied Microbiology, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China; Environmental Microbiology Key Laboratory of Sichuan Province, Chengdu 610041, China. Electronic address: zhuxy@cib.ac.cn.
  • Shiyin Li
    School of Environment, Jiangsu Province Engineering Research Center of Environmental Risk Prevention and Emergency Response Technology, Nanjing Normal University, Nanjing, Jiangsu 210023, PR China.
  • HongLiang Bi
  • Lina Guan
    General Hospital of Xinjiang Military Region of the Chinese People's Liberation Army, Urumqi 830000, Xinjiang, China.
  • Haiyang Liu
  • Zhaolin Lu
    Department of Information, The First People's Hospital of Xuzhou (Municipal Hospital Affiliated to Xuzhou Medical University), Xuzhou, Jiangsu, China (mainland).

Keywords

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