CRCFound: A Colorectal Cancer CT Image Foundation Model Based on Self-Supervised Learning.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Published Date:

Abstract

Accurate risk stratification is crucial for determining the optimal treatment plan for patients with colorectal cancer (CRC). However, existing deep learning models perform poorly in the preoperative diagnosis of CRC and exhibit limited generalizability, primarily due to insufficient annotated data. To address these issues, CRCFound, a self-supervised learning-based CT image foundation model for CRC is proposed. After pretraining on 5137 unlabeled CRC CT images, CRCFound can learn universal feature representations and provide efficient and reliable adaptability for various clinical applications. Comprehensive benchmark tests are conducted on six different diagnostic tasks and two prognosis tasks to validate the performance of the pretrained model. Experimental results demonstrate that CRCFound can easily transfer to most CRC tasks and exhibit outstanding performance and generalization ability. Overall, CRCFound can solve the problem of insufficient annotated data and perform well in a wide range of downstream tasks of CRC, making it a promising solution for accurate diagnosis and personalized treatment of CRC patients.

Authors

  • Jing Yang
    Beijing Novartis Pharma Co. Ltd., Beijing, China.
  • Du Cai
    Department of General Surgery (Department of Colorectal Surgery), The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510655, China.
  • Junwei Liu
    Guangzhou National Laboratory, Guangzhou, 510005, China.
  • Zhenfeng Zhuang
    Department of Computer Science at the School of Informatics, Xiamen University, Xiamen, 361005, China.
  • Yibin Zhao
    Department of Colorectal Surgery, Ningbo Medical Center Lihuili Hospital (Affiliated Lihuili Hospital of Ningbo University), Ningbo, 315000, China.
  • Feng-Ao Wang
    Guangzhou National Laboratory, Guangzhou, 510005, China.
  • Chenghang Li
  • Chuling Hu
    Department of General Surgery (Department of Colorectal Surgery), The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510655, China.
  • Baowen Gai
    Department of General Surgery (Department of Colorectal Surgery), The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510655, China.
  • Yiping Chen
    Beijing Engineering Research Center for BioNanotechnology & CAS Key Laboratory for Biological Effects of Nanomaterials and Nanosafety, National Center for Nanoscience and Technology, Beijing 100190, PR China. Electronic address: chenyp@nanoctr.cn.
  • Yixue Li
  • Liansheng Wang
    Department of Computer Science, Xiamen University, Xiamen 361005, China.
  • Feng Gao
    Department of Statistics, UCLA, Los Angeles, CA 90095, USA.
  • Xiaojian Wu
    Department of Colorectal Surgery, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, China. wuxjian@mail.sysu.edu.cn.

Keywords

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