Static Segmentation by Tracking: A Frustratingly Label-Efficient Approach to Fine-Grained Segmentation

Journal: arXiv
Published Date:

Abstract

We study image segmentation in the biological domain, particularly trait and part segmentation from specimen images (e.g., butterfly wing stripes or beetle body parts). This is a crucial, fine-grained task that aids in understanding the biology of organisms. The conventional approach involves hand-labeling masks, often for hundreds of images per species, and training a segmentation model to generalize these labels to other images, which can be exceedingly laborious. We present a label-efficient method named Static Segmentation by Tracking (SST). SST is built upon the insight: while specimens of the same species have inherent variations, the traits and parts we aim to segment show up consistently. This motivates us to concatenate specimen images into a ``pseudo-video'' and reframe trait and part segmentation as a tracking problem. Concretely, SST generates masks for unlabeled images by propagating annotated or predicted masks from the ``pseudo-preceding'' images. Powered by Segment Anything Model 2 (SAM~2) initially developed for video segmentation, we show that SST can achieve high-quality trait and part segmentation with merely one labeled image per species -- a breakthrough for analyzing specimen images. We further develop a cycle-consistent loss to fine-tune the model, again using one labeled image. Additionally, we highlight the broader potential of SST, including one-shot instance segmentation on images taken in the wild and trait-based image retrieval.

Authors

  • Zhenyang Feng
  • Zihe Wang
  • Saul Ibaven Bueno
  • Tomasz Frelek
  • Advikaa Ramesh
  • Jingyan Bai
  • Lemeng Wang
  • Zanming Huang
  • Jianyang Gu
  • Jinsu Yoo
  • Tai-Yu Pan
  • Arpita Chowdhury
  • Michelle Ramirez
  • Elizabeth G. Campolongo
  • Matthew J. Thompson
  • Christopher G. Lawrence
  • Sydne Record
  • Neil Rosser
  • Anuj Karpatne
  • Daniel Rubenstein
  • Hilmar Lapp
  • Charles V. Stewart
  • Tanya Berger-Wolf
  • Yu Su
  • Wei-Lun Chao