Equivariant Spherical CNNs for Accurate Fiber Orientation Distribution Estimation in Neonatal Diffusion MRI with Reduced Acquisition Time
Journal:
arXiv
Published Date:
Apr 2, 2025
Abstract
Early and accurate assessment of brain microstructure using diffusion
Magnetic Resonance Imaging (dMRI) is crucial for identifying neurodevelopmental
disorders in neonates, but remains challenging due to low signal-to-noise ratio
(SNR), motion artifacts, and ongoing myelination. In this study, we propose a
rotationally equivariant Spherical Convolutional Neural Network (sCNN)
framework tailored for neonatal dMRI. We predict the Fiber Orientation
Distribution (FOD) from multi-shell dMRI signals acquired with a reduced set of
gradient directions (30% of the full protocol), enabling faster and more
cost-effective acquisitions. We train and evaluate the performance of our sCNN
using real data from 43 neonatal dMRI datasets provided by the Developing Human
Connectome Project (dHCP). Our results demonstrate that the sCNN achieves
significantly lower mean squared error (MSE) and higher angular correlation
coefficient (ACC) compared to a Multi-Layer Perceptron (MLP) baseline,
indicating improved accuracy in FOD estimation. Furthermore, tractography
results based on the sCNN-predicted FODs show improved anatomical plausibility,
coverage, and coherence compared to those from the MLP. These findings
highlight that sCNNs, with their inherent rotational equivariance, offer a
promising approach for accurate and clinically efficient dMRI analysis, paving
the way for improved diagnostic capabilities and characterization of early
brain development.