Large Language Model-Based Agents for Automated Research Reproducibility: An Exploratory Study in Alzheimer's Disease
Journal:
arXiv
Published Date:
May 29, 2025
Abstract
Objective: To demonstrate the capabilities of Large Language Models (LLMs) as
autonomous agents to reproduce findings of published research studies using the
same or similar dataset.
Materials and Methods: We used the "Quick Access" dataset of the National
Alzheimer's Coordinating Center (NACC). We identified highly cited published
research manuscripts using NACC data and selected five studies that appeared
reproducible using this dataset alone. Using GPT-4o, we created a simulated
research team of LLM-based autonomous agents tasked with writing and executing
code to dynamically reproduce the findings of each study, given only study
Abstracts, Methods sections, and data dictionary descriptions of the dataset.
Results: We extracted 35 key findings described in the Abstracts across 5
Alzheimer's studies. On average, LLM agents approximately reproduced 53.2% of
findings per study. Numeric values and range-based findings often differed
between studies and agents. The agents also applied statistical methods or
parameters that varied from the originals, though overall trends and
significance were sometimes similar.
Discussion: In some cases, LLM-based agents replicated research techniques
and findings. In others, they failed due to implementation flaws or missing
methodological detail. These discrepancies show the current limits of LLMs in
fully automating reproducibility assessments. Still, this early investigation
highlights the potential of structured agent-based systems to provide scalable
evaluation of scientific rigor.
Conclusion: This exploratory work illustrates both the promise and
limitations of LLMs as autonomous agents for automating reproducibility in
biomedical research.