Infarctsize-AI: an efficient infarct size image analysis tool for small rodent myocardial infarction studies

Journal: bioRxiv
Published Date:

Abstract

Myocardial infarct size (IS) is the gold standard end-point in shorth-term studies on cardioprotection. However, IS quantification in rodent models with standard Evans Blue and 2,3,5-triphenyltetrazolium chloride (TTC) staining is time-consuming and prone to inter-observer variance. Therefore, we aimed to develop an artificial intelligence (AI)-based application to reduce time and inter-observer variability of IS analysis in rodent acute myocardial infarction (MI) models. We used TTC/Evans blue-stained heart slice images of independent laboratories from previously published projects. Rat (n = 325 and 248 slices) and mouse (n = 77 slices) datasets were used to train deep learning segmentation models with three different neural network architectures, which were combined into a single AI analysis. AI analysis was compared with manual analysis on rat data from a training laboratory (internal data, n = 496 slices, n = 41 whole-hearts) and data from independent laboratories (external data, n = 60 and 62 slices). Additionally, two independent evaluators performed manual and AI-assisted analysis, consisting of AI-analysis and its manual correction, on internal (n = 36 slices) and external data (n = 37 slices). Lin’s concordance correlation coefficient (CCC) between IS/AAR values from manual and AI analysis was 0.844 with 95% CI of [0.814; 0.869] for images of internal data heart slices. On external data heart slices, AI accurately annotated slice area and AAR but failed to annotate infarcted area. On internal whole-heart data, CCC between AI and AI-assisted IS/AAR was 0.894 with 95% CI of [0.812; 0.942]. AI-assisted analysis reduced evaluation time on both internal and external datasets and increased region overlap for AAR between the two independent evaluators on dependent data. AI-assisted analysis significantly reduced analysis time and inter-observer variability. For optimal performance, lab-specific AI training is recommended. Infarctsize-AI™ is available at https://infarctsize.com. Myocardial infarct size (IS) is the gold-standard end-point in shorth-term studies to assess potential cardioprotective therapies against acute myocardial infarction (AMI). However, IS quantification in rodent AMI models is time-consuming and prone to inter-observer variance. Therefore, we developed an AI-based software that can reduce analysis time and inter-observer variability and facilitate documentation, which facilitates the clinical translation of potential cardioprotective therapies.

Authors

  • Csenger Kovácsházi; Dóra Kapui; Bennet Y Weber; Tamás G Gergely; Gábor B Brenner; Bence Ágg; Csanád Tabajdi; Adrienn Rácz; András Horváth; Sauri Hernandez-Resendiz; Derek J Hausenloy; Reinis Vilskersts; Marta Oknińska; Michał Waszkiewicz; Michal Mączewski; Arnold Molnár; Tamara Szabados; Péter Bencsik; Thomas Krieg; Javier Inserte; Rainer Schulz; Coert J Zuurbier; Ioanna Andreadou; Bruno K Podesser; Péter Ferdinandy; Zoltán Giricz