Selective Glucocorticoid Receptor Modulators of Immune Checkpoint Function

Journal: bioRxiv
Published Date:

Abstract

Glucocorticoids (GCs) coordinate immunity, inflammation and metabolism through allosteric regulation of the glucocorticoid receptor (GR) transcription factor. GCs are indispensable anti-inflammatory drugs yet linking specific ligand and receptor structural states to specific biological outcomes has remained a major barrier to designing safer, more selective therapies. Using structure based design, we developed selective glucocorticoid receptor modulators (SGRMs) of immune function by extending a steroidal scaffold from the ligand-binding pocket into an adjacent solvent channel. These SGRMs suppressed T cell pro-inflammatory cytokines and promoted differentiation of memory precursor T cells while showing minimal induction of M2 macrophage polarization or T cell checkpoint proteins PD1 and CTLA4, all key targets of immunotherapy. Molecular dynamics simulations revealed that solvent-channel substituents function as a lever arm to drive dynamic oscillations in the steroid core, thereby allosterically tuning GR activity states. Systematic perturbation of immune cells with a graded series of ligands enabled a ligand perturbation with machine learning (LPML) framework to map coregulated responses across cell types and identified effector T cell gene networks tightly coupled with immune checkpoint induction. This approach outlines a general strategy for decoding the logic of allosteric drug action and engineering SGRMs with tailored immunomodulatory profiles.

Authors

  • Kobyski
  • R. R.; Min
  • C. K.; Nwachukwu
  • J. C.; Koenig
  • M.; Zhang
  • H.; Moncada
  • L.; Venables
  • T. T.; Schell
  • B.-B.; Stein
  • W. J.; McCown
  • C.; Shumate
  • J.; Bonilla
  • E.; Sobh
  • A.; Romero-Toledo
  • A.; Pipkin
  • M. E.; Janiszewska
  • M.; Scampavia
  • L.; Spicer
  • T. P.; Licht
  • J. D.; Rogatsky
  • I.; Kamenecka
  • T. M.; Solt
  • L.; Nettles
  • K. W.