Machine Learning for Classification in Lung Cancer Using Routine Clinical and Laboratory Data.

Journal: Annals of surgical oncology
Published Date: Dec 3, 2025

Abstract

BACKGROUND: Accurate pathological classification of lung cancer is essential for informing treatment strategies. However, invasive biopsy procedures are not feasible for high-risk patients or those with inaccessible lesions. This study aimed to develop a machine learning model utilizing routine clinical and laboratory data for classification of non-invasive lung cancer. METHODS: Data from patients admitted to Sichuan Provincial Cancer Hospital were retrospectively analyzed. Key features were determined using LASSO and Boruta algorithms. Four machine learning models, including logistic regression, extreme gradient boosting (XGBoost), categorical boosting (CatBoost), and random forest (RandomForest), were trained and optimized through five-fold cross-validation. Model performance was assessed using the area under the receiver operating characteristic curve (AUC), accuracy, and F1 score. An online calculator was developed using R Shiny for clinical deployment. RESULTS: A total of 1122 patients with lung cancer were included and randomly assigned to the training and test sets. In the training set, 16 features were incorporated into the models. The RandomForest model demonstrated superior performance compared with the other models, achieving an AUC of 0.999, an accuracy of 0.984, and an F1 score of 1.000. Notably, sex and tumor markers were identified as significant predictors. In the test set, the RandomForest model attained a micro-averaged AUC of 0.969 and macro-averaged AUC of 0.940. Sensitivity and specificity varied from 0.667 to 0.995 across subtypes. A web-based tool was implemented to facilitate real-time clinical application ( https://nkuwangkai.shinyapps.io/lung-cancer-v1/ ). CONCLUSION: This study presented a robust, non-invasive machine learning model for lung cancer subtype classification, addressing critical gaps in clinical practice for biopsy-ineligible patients. A web-based calculator was developed to facilitate clinical application. Nonetheless, future multicenter validation is warranted to expand the generalizability of this model and promote adoption in diverse healthcare settings.

Authors

  • Chang Liu
    Key Lab of Cell Differentiation and Apoptosis of Ministry of Education, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
  • Yulin Liao
    Department of Cardiology, Nanfang Hospital, Southern Medical University, Guangzhou, Guangdong, 510515, P. R. China.
  • Dongsheng Wang
  • Jie Yang
    Key Laboratory of Development and Maternal and Child Diseases of Sichuan Province, Department of Pediatrics, Sichuan University, Chengdu, China.
  • Liwei Zhao
  • Xiaoling Liu
    Department of Endocrinology, Affiliated Hospital of Guilin Medical University, Guilin, Guangxi, China.
  • Zuo Wang
    China Jiliang University, Hangzhou, China.
  • Lichun Wu
    Department of Clinical Laboratory, Sichuan Clinical Research Center for Cancer, Sichuan Cancer Hospital & Institute, Sichuan Cancer Center, University of Electronic Science and Technology of China, Chengdu, China. [email protected].

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