Computer vision for plant pathology: A review with examples from cocoa agriculture.

Journal: Applications in plant sciences
Published Date:

Abstract

Plant pathogens can decimate crops and render the local cultivation of a species unprofitable. In extreme cases this has caused famine and economic collapse. Timing is vital in treating crop diseases, and the use of computer vision for precise disease detection and timing of pesticide application is gaining popularity. Computer vision can reduce labour costs, prevent misdiagnosis of disease, and prevent misapplication of pesticides. Pesticide misapplication is both financially costly and can exacerbate pesticide resistance and pollution. Here, we review the application and development of computer vision and machine learning methods for the detection of plant disease. This review goes beyond the scope of previous works to discuss important technical concepts and considerations when applying computer vision to plant pathology. We present new case studies on adapting standard computer vision methods and review techniques for acquiring training data, the use of diagnostic tools from biology, and the inspection of informative features. In addition to an in-depth discussion of convolutional neural networks (CNNs) and transformers, we also highlight the strengths of methods such as support vector machines and evolved neural networks. We discuss the benefits of carefully curating training data and consider situations where less computationally expensive techniques are advantageous. This includes a comparison of popular model architectures and a guide to their implementation.

Authors

  • Jamie R Sykes
    Department of Computer Science University of York Deramore Lane, York YO10 5GH Yorkshire United Kingdom.
  • Katherine J Denby
    Centre for Novel Agricultural Products, Department of Biology University of York Wentworth Way, York YO10 5DD Yorkshire United Kingdom.
  • Daniel W Franks
    Department of Computer Science University of York Deramore Lane, York YO10 5GH Yorkshire United Kingdom.

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