Deformable image registration for self-supervised cardiac phase detection in cardiac magnetic resonance images of patients with various diseases.
Journal:
Medical image analysis
Published Date:
Jun 10, 2026
Abstract
Cardiovascular magnetic resonance (CMR) is widely used to assess cardiac function, but individual cardiac cycles complicate automatic temporal comparison and sub-phase analysis. Accurate cardiac keyframe detection can eliminate this problem. However, automatic methods solely derive end-systole (ES) and end-diastole (ED) frames from left ventricular volume curves, which do not provide a deeper insight into myocardial motion. We propose a self-supervised deep learning method detecting five keyframes in short-axis (SAX) and four-chamber (4CH) cine CMR. Initially, dense deformable registration fields are derived from CMR to compute a 1D motion descriptor encoding global cardiac contraction and relaxation patterns. Keyframes are derived from these characteristic curves with a set of rules. The method was independently evaluated for both views using four databases encompassing multiple centre, vendor and disease. M&Ms-2 (n=360) was used for training and evaluation; M&Ms (n=345) and ACDC (n=100) for repeatability control. Generalisability to patients with rare congenital heart defects was tested using the German Competence Network (GCN) database. A disease-stratified analysis confirmed stable performance across cardiomyopathies and congenital abnormalities. Our method improved detection accuracy by 49%/59% for SAX and 31%/39% for 4CH in ED/ES over the volume-based approach, with mean cyclic frame difference (cFD) below 1.3 and 1.2 frames for SAX and 4CH respectively. Our framework enables temporally aligned inter- and intra-patient analysis of cardiac dynamics, irrespective of cycle or phase lengths for aligned strain analysis or temporal normalisation. Code and annotations are available at: https://github.com/Cardio-AI/cmr-multi-view-phase-detection.git.
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