Using Graph Representation Learning to Predict Salivary Cortisol Levels in Pancreatic Cancer Patients.

Journal: Journal of healthcare informatics research
Published Date:

Abstract

Cortisol is a glucocorticoid hormone that is critical to immune system functioning. Studies show that prolonged exposure to high levels of cortisol can lead to a range of physical health ailments including the progression of tumor growth. The ability to monitor cortisol levels over time can therefore be used to facilitate decision-making during cancer treatment. However, collecting serum or saliva samples to monitor cortisol in situ is inconvenient, costly, and impractical. In this paper, we propose a general predictive modeling process that uses passively sensed actigraphy data to predict underlying salivary cortisol levels using graph representation learning. We compare machine learning models with handcrafted feature engineering and with graph representation learning, which includes Graph2Vec, FeatherGraph, GeoScattering and NetLSD. Our preliminary results generated from data from 10 newly diagnosed pancreatic cancer patients demonstrate that machine learning models with graph representation learning can outperform the handcrafted feature engineering to predict salivary cortisol levels.

Authors

  • Guimin Dong
    Engineering Systems and Environment, University of Virginia, 151 Engineers Way, Charlottesville, VA 22901 USA.
  • Mehdi Boukhechba
    Janssen Pharmaceutical Companies of Johnson & Johnson, USA.
  • Kelly M Shaffer
    School of Medicine, University of Virginia, 1215 Lee St, Charlottesville, VA 22903 USA.
  • Lee M Ritterband
    School of Medicine, University of Virginia, 1215 Lee St, Charlottesville, VA 22903 USA.
  • Daniel G Gioeli
    School of Medicine, University of Virginia, 1215 Lee St, Charlottesville, VA 22903 USA.
  • Matthew J Reilley
    School of Medicine, University of Virginia, 1215 Lee St, Charlottesville, VA 22903 USA.
  • Tri M Le
    School of Medicine, University of Virginia, 1215 Lee St, Charlottesville, VA 22903 USA.
  • Paul R Kunk
    School of Medicine, University of Virginia, 1215 Lee St, Charlottesville, VA 22903 USA.
  • Todd W Bauer
    School of Medicine, University of Virginia, 1215 Lee St, Charlottesville, VA 22903 USA.
  • Philip I Chow
    School of Medicine, University of Virginia, 1215 Lee St, Charlottesville, VA 22903 USA.

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