EP-PINNs: Cardiac Electrophysiology Characterisation Using Physics-Informed Neural Networks.

Journal: Frontiers in cardiovascular medicine
Published Date:

Abstract

Accurately inferring underlying electrophysiological (EP) tissue properties from action potential recordings is expected to be clinically useful in the diagnosis and treatment of arrhythmias such as atrial fibrillation. It is, however, notoriously difficult to perform. We present EP-PINNs (Physics Informed Neural Networks), a novel tool for accurate action potential simulation and EP parameter estimation from sparse amounts of EP data. We demonstrate, using 1D and 2D data, how EP-PINNs are able to reconstruct the spatio-temporal evolution of action potentials, whilst predicting parameters related to action potential duration (APD), excitability and diffusion coefficients. EP-PINNs are additionally able to identify heterogeneities in EP properties, making them potentially useful for the detection of fibrosis and other localised pathology linked to arrhythmias. Finally, we show EP-PINNs effectiveness on biological preparations, by characterising the effect of anti-arrhythmic drugs on APD using optical mapping data. EP-PINNs are a promising clinical tool for the characterisation and potential treatment guidance of arrhythmias.

Authors

  • Clara Herrero Martin
    Department of Bioengineering, Imperial College London, London, United Kingdom.
  • Alon Oved
    Department of Computing, Imperial College London, London, United Kingdom.
  • Rasheda A Chowdhury
    National Heart and Lung Institute, Imperial College London, London, United Kingdom.
  • Elisabeth Ullmann
    Department of Mathematics, Technical University of Munich, Munich, Germany.
  • Nicholas S Peters
    National Heart and Lung Institute, Hammersmith Campus, Imperial College London, 72 Du Cane Road, W12 0HS, London, UK.
  • Anil A Bharath
    Department of Bioengineering, Imperial College London, London, United Kingdom.
  • Marta Varela
    National Heart and Lung Institute, Imperial College London, London, United Kingdom.

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