Complete chloroplast genome of (Rosaceae), a wild flowering cherry from Japan.

Journal: Mitochondrial DNA. Part B, Resources
Published Date: Dec 13, 2019

Abstract

is a flowering tree species with high ornamental and economic values. We determined the first complete chloroplast genome of using genome skimming approach. The cp genome was 157,813 bp long, with a large single-copy region (LSC) of 85,931 bp and a small single-copy region (SSC) of 19,120 bp separated by a pair of inverted repeats (IRs) of 26,381 bp. It encodes 129 genes, including 84 protein-coding genes, 37 tRNA genes, and 8 ribosomal RNA genes. We also reconstructed the phylogeny of using maximum likelihood (ML) method, including our data and previously reported cp genomes of related taxa. The phylogenetic analysis indicated that is closely related with var. .

Authors

  • Dong Sheng
    Zhejiang Academy of Forestry, Hangzhou, China.
  • Lu-Dan Zhou
    College of Life Sciences, Taizhou University, Taizhou, China.
  • Toshio Katsuki
    Tama Forest Science Garden, Forestry and Forest Products Research Institute, Hachioji, Japan.
  • Zhong-Shuai Sun
    Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou University, Taizhou, China.
  • Xin-Hong Liu
    Zhejiang Academy of Forestry, Hangzhou, China.

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