The complete chloroplast genome of , lights into phylogenetic and taxonomic analyses.

Journal: Mitochondrial DNA. Part B, Resources
Published Date: Dec 9, 2019

Abstract

a precious endangered species in China, it has a long history of growth and high ornamental and edible value. In this study, we reported a complete chloroplast genome of , in which the whole genome is 153,019 bp in length, and includes one large single copy region of 70,585 bp, one small single copy region of 17,527 bp, and a pair of inverted repeat region of 26,530 bp. It contains 130 genes, comprising 84 protein-coding genes, 36 transfer RNA, and eight rRNA genes. The overall AT content of the chloroplast genome is 62.9%. In the maximum-likelihood and phylogenetic analysis with the reported chloroplast genomes of , it showed that and get a high support rate (ML (BS) =100%) and become sister groups. It indicates that the study on the complete chloroplast genome of is more closely related to than related to

Authors

  • Jie Li
    Guangdong-Hong Kong-Macao Greater Bay Area Artificial Intelligence Application Technology Research Institute, Shenzhen Polytechnic University, Shenzhen, China.
  • Yixin Liu
    Beijing Key Laboratory of Agricultural Genetic Resources and Biotechnology, Beijing Functional Flower Engineering Technology Research Center, Beijing Agro-Biotechnology Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China.
  • Qingjiang Wang
    College of Landscape and Ecological Engineering, Hebei University of Engineering, Handan, China.
  • Xuqing Chen
    Beijing Key Laboratory of Agricultural Genetic Resources and Biotechnology, Beijing Functional Flower Engineering Technology Research Center, Beijing Agro-Biotechnology Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China.
  • Fengping Yang
    Beijing Key Laboratory of Agricultural Genetic Resources and Biotechnology, Beijing Functional Flower Engineering Technology Research Center, Beijing Agro-Biotechnology Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China.
  • Xiuhai Zhang
    Beijing Key Laboratory of Agricultural Genetic Resources and Biotechnology, Beijing Functional Flower Engineering Technology Research Center, Beijing Agro-Biotechnology Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China.
  • Yunpeng Du
    Beijing Key Laboratory of Agricultural Genetic Resources and Biotechnology, Beijing Functional Flower Engineering Technology Research Center, Beijing Agro-Biotechnology Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China.

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