Computational Identification of piRNAs Using Features Based on RNA Sequence, Structure, Thermodynamic and Physicochemical Properties.

Journal: Current genomics
Published Date:

Abstract

RATIONALE: PIWI-interacting RNAs (piRNAs) are a recently-discovered class of small non-coding RNAs (ncRNAs) with a length of 21-35 nucleotides. They play a role in gene expression regulation, transposon silencing, and viral infection inhibition. Once considered as "dark matter" of ncRNAs, piRNAs emerged as important players in multiple cellular functions in different organisms. However, our knowledge of piRNAs is still very limited as many piRNAs have not been yet identified due to lack of robust computational predictive tools.

Authors

  • Isha Monga
    Cellular Virology Laboratory, Department of Biological Sciences, Indian Institute of Science Education and Research, Mohali (IISER Mohali) Sector 81, S.A.S. Nagar, Mohali-140306, India.
  • Indranil Banerjee
    Cellular Virology Laboratory, Department of Biological Sciences, Indian Institute of Science Education and Research, Mohali (IISER Mohali) Sector 81, S.A.S. Nagar, Mohali-140306, India.

Keywords

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