Malaria parasite detection and cell counting for human and mouse using thin blood smear microscopy.

Journal: Journal of medical imaging (Bellingham, Wash.)
Published Date:

Abstract

Despite the remarkable progress that has been made to reduce global malaria mortality by 29% in the past 5 years, malaria is still a serious global health problem. Inadequate diagnostics is one of the major obstacles in fighting the disease. An automated system for malaria diagnosis can help to make malaria screening faster and more reliable. We present an automated system to detect and segment red blood cells (RBCs) and identify infected cells in Wright-Giemsa stained thin blood smears. Specifically, using image analysis and machine learning techniques, we process digital images of thin blood smears to determine the parasitemia in each smear. We use a cell extraction method to segment RBCs, in particular overlapping cells. We show that a combination of RGB color and texture features outperforms other features. We evaluate our method on microscopic blood smear images from human and mouse and show that it outperforms other techniques. For human cells, we measure an absolute error of 1.18% between the true and the automatic parasite counts. For mouse cells, our automatic counts correlate well with expert and flow cytometry counts. This makes our system the first one to work for both human and mouse.

Authors

  • Mahdieh Poostchi
    Lister Hill National Center for Biomedical Communications, National Library of Medicine, Bethesda, Maryland, United States.
  • Ilker Ersoy
    University of Missouri-Columbia, Informatics Institute, Missouri, United States.
  • Katie McMenamin
    University of Colorado Boulder, Aerospace Engineering Sciences Department, Boulder, Colorado, United States.
  • Emile Gordon
    National Institute of Allergy and Infectious Diseases, Division of Intramural Research, Rockville, Maryland, United States.
  • Nila Palaniappan
    University of Missouri-Kansas City, School of Medicine, Kansas City, Missouri, United States.
  • Susan Pierce
    National Institute of Allergy and Infectious Diseases, Division of Intramural Research, Rockville, Maryland, United States.
  • Richard J Maude
    University of Oxford, Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, Oxford, United Kingdom.
  • Abhisheka Bansal
    Jawaharlal Nehru University, School of Life Sciences, New Delhi, India.
  • Prakash Srinivasan
    National Institute of Allergy and Infectious Diseases, Laboratory of Malaria and Vector Research, Rockville, Maryland, United States.
  • Louis Miller
    National Institute of Allergy and Infectious Diseases, Laboratory of Malaria and Vector Research, Rockville, Maryland, United States.
  • Kannappan Palaniappan
    University of Missouri-Columbia, Department of Electrical Engineering and Computer Science, Columbia, Missouri, United States.
  • George Thoma
    Lister Hill National Center for Biomedical Communications, National Library of Medicine, Bethesda, Maryland, United States.
  • Stefan Jaeger
    Lister Hill National Center for Biomedical Communications, National Library of Medicine, Bethesda, Maryland, United States.

Keywords

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