Beyond the Brain: MIDS Extends BIDS to Multiple Modalities and Anatomical Regions.

Journal: Studies in health technology and informatics
Published Date:

Abstract

Brain Imaging Data Structure (BIDS) provides a valuable tool to organise brain imaging data into a clear and easy standard directory structure. Moreover, BIDS is widely supported by the scientific community and has been established as a powerful standard for medical imaging management. Nonetheless, the original BIDS is restricted to magnetic resonance imaging (MRI) of the brain, limiting its implantation to other techniques and anatomical regions. We developed Medical Imaging Data Structure (MIDS), conceived to extend BIDS methodology to other anatomical regions and multiple imaging systems in these areas. The MIDS standard was developed to store and manage medical images as an extension of BIDS. It allows the user to handily save studies of multiple anatomical regions and imaging techniques. Besides, MIDS improves the classification of multiple images within the structure, allowing the possibility to unify them in a single study to apply on them preprocessing or artificial intelligence algorithms. Finally, the results generated are saved in the derivatives folder.

Authors

  • Jose Manuel Saborit-Torres
    Unidad Mixta de Imagen Biomédica FISABIO-CIPF. Fundación para el Fomento de la Investigación Sanitaria y Biomédica de la Comunidad Valenciana - València, Spain.
  • Silvia Nadal-Almela
    Unidad Mixta de Imagen Biomédica FISABIO-CIPF. Fundación para el Fomento de la Investigación Sanitaria y Biomédica de la Comunidad Valenciana - València, Spain.
  • Joaquim Angel Montell-Serrano
    Unidad Mixta de Imagen Biomédica FISABIO-CIPF. Fundación para el Fomento de la Investigación Sanitaria y Biomédica de la Comunidad Valenciana - València, Spain.
  • Elena Oliver-Garcia
    Unidad Mixta de Imagen Biomédica FISABIO-CIPF. Fundación para el Fomento de la Investigación Sanitaria y Biomédica de la Comunidad Valenciana - València, Spain.
  • Hector Carceller
    Unidad Mixta de Imagen Biomédica FISABIO-CIPF. Fundación para el Fomento de la Investigación Sanitaria y Biomédica de la Comunidad Valenciana - València, Spain.
  • Jon Ander Gómez-Ádrian
    Department of Computer Systems and Computation, Universitat Politècnica de València - València, Spain.
  • Marisa Caparrós-Redondo
    Unidad Mixta de Imagen Biomédica FISABIO-CIPF. Fundación para el Fomento de la Investigación Sanitaria y Biomédica de la Comunidad Valenciana - València, Spain.
  • Francisco Garcia-Garcia
    Computational Genomics Department, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain.
  • Julio Domenech-Fernández
    Hospital Arnau de Vilanova - Valencia, Spain.
  • Maria de la Iglesia-Vayá
    Foundation for the Promotion of the Research in Healthcare and Biomedicine (FISABIO), Valencia, Spain. Electronic address: delaiglesia_mar@gva.es.