Learning emergent partial differential equations in a learned emergent space.

Journal: Nature communications
Published Date:

Abstract

We propose an approach to learn effective evolution equations for large systems of interacting agents. This is demonstrated on two examples, a well-studied system of coupled normal form oscillators and a biologically motivated example of coupled Hodgkin-Huxley-like neurons. For such types of systems there is no obvious space coordinate in which to learn effective evolution laws in the form of partial differential equations. In our approach, we accomplish this by learning embedding coordinates from the time series data of the system using manifold learning as a first step. In these emergent coordinates, we then show how one can learn effective partial differential equations, using neural networks, that do not only reproduce the dynamics of the oscillator ensemble, but also capture the collective bifurcations when system parameters vary. The proposed approach thus integrates the automatic, data-driven extraction of emergent space coordinates parametrizing the agent dynamics, with machine-learning assisted identification of an emergent PDE description of the dynamics in this parametrization.

Authors

  • Felix P Kemeth
    Department of Chemical and Biomolecular Engineering, Whiting School of Engineering, Johns Hopkins University, 3400 North Charles Street, Baltimore, MD, 21218, USA.
  • Tom Bertalan
    Department of Chemical and Biomolecular Engineering, Whiting School of Engineering, Johns Hopkins University, 3400 North Charles Street, Baltimore, MD, 21218, USA.
  • Thomas Thiem
    The Department of Chemical and Biological Engineering, Princeton University, Princeton, NJ, 08544, USA.
  • Felix Dietrich
    Department of Informatics, School of Computation, Information, and Technology, Technical University of Munich, Boltzmannstr. 3, 85748, Garching, Germany.
  • Sung Joon Moon
    The Department of Chemical and Biological Engineering, Princeton University, Princeton, NJ, 08544, USA.
  • Carlo R Laing
    School of Natural and Computational Sciences, Massey University, Auckland, New Zealand.
  • Ioannis G Kevrekidis
    Department of Chemical and Biomolecular Engineering; Applied Mathematics and Statistics; and Urology (JHMS), Johns Hopkins University, Baltimore, MD 21218, yannisk@jhu.edu.