AIMC Journal:
bioRxiv

Showing 1371 to 1380 of 4956 articles

AI-based Psychiatric Prediction in Youth: Neuroimaging Provides Minimal Gains Beyond Confounds

bioRxiv
Recent advances in artificial intelligence (AI) have raised interest in its potential to similarly progress biological psychiatry. This study investigates the current utility of AI models in predicting psychiatric phenotypes in youth - a critical win...

Constrained protein Large Language Model illustrated in protein stability, function and epistasis

bioRxiv
Our understanding of protein function and evolution is largely based on the relationship between amino acid sequence and overall fold, now effectively captured by computational models. Yet predicting how mutations--shaped by epistasis--alter protein ...

Using Disinhibition versus Direct Control in a Spiking Neural Model of Dopamine-Driven Reinforcement Learning

bioRxiv
Dopaminergic signalling is central to value learning and decision making. It has been observed that multiple pathways with different patterns of connectivity project to midbrain dopaminergic neurons, some involving direct excitatory projections while...

Molecular Characterization of T-Lineage Acute Lymphoblastic Leukemia by an Optimal-Transport Based Multi-Omics Integration Framework

bioRxiv
T-lineage acute lymphoblastic leukemia (T-ALL) is an aggressive pediatric malignancy characterized by complex heterogeneity across multiple molecular layers. Accurate subtyping is essential for understanding disease mechanisms, risk stratification, a...

dbGIST: An LLM-Assisted Multi-Omics Resource for Target Exploration and Cross-Dataset Validation in Gastrointestinal Stromal Tumors

bioRxiv
Gastrointestinal stromal tumors (GISTs) are the most common mesenchymal neoplasms of the gastrointestinal tract, yet GIST-specific omics evidence remains scattered across small cohorts and is not represented as a dedicated disease project in major ca...

Interpretable morphology mapping of peripheral blood leukocytes using annotation-efficient artificial intelligence

bioRxiv
Background Peripheral blood smears (PBS) review is labor-intensive, subjective, and challenging for rare or morphologically heterogeneous cell types in hematologic malignancies. Artificial intelligence (AI) offers a scalable alternative, but broader ...

Estimation of the curved body length of tuna larvae from microscope images using a zero-shot model and image processing techniques

bioRxiv
Fixed larval specimens often shrink and curve, making length measurement labor-intensive. Although recent studies have demonstrated efficient fish-length estimation from images using deep learning, methods for estimating curved length remain limited....

Nanostructured Zirconia thin films as neurogliomorphic interface for neural cells of central and peripheral nervous system

bioRxiv
Recent advances in neuroscience have highlighted the central role of glial cells, particularly astrocytes, in regulating neural network activity through calcium-dependent neuron-glia communication. In parallel, nanostructured cluster-assembled materi...

CryoARC: Atomic-resolution conformational landscapes of protein assemblies from cryo-EM single particles with evolutionary priors

bioRxiv
Single-particle cryo-electron microscopy (cryo-EM) reveals structural heterogeneity in macromolecular complexes, but recovering continuous conformational landscapes at high resolution remains challenging. Here, we introduce CryoARC, a deep learning f...

WITHDRAWN: Scalable Microbiome Network Inference: Mitigating Sparsity and Computational Bottlenecks in Random Effects Models

bioRxiv
The application of Large Language Models (LLMs) and Transformers to biological and healthcare datasets requires the extraction of highly accurate, noise-filtered ecological networks. The Random Effects Model (REM) is a powerful statistical method for...