Study Objectives Automated sleep staging underpins clinical sleep assessment and translational neuroscience, yet most data analyses work addresses human and animal data separately. We tested whether a seizure-oriented machine learning framework can b...
Differences in microbiome composition profoundly influence drug response, yet methods to model the metabolic interplay between tumors, microbes, and therapeutics remain limited. We present a generalizable framework combining machine learning and geno...
In recent years, high dimensional omics analyses have become more commonplace for investigating complex biological systems. Typically, these studies attempt to identify key biomolecules associated with a particular biological process. Often, machine ...
Quantifying biological aging is crucial for understanding functional decline before the onset of morbidity. While many accelerated aging and frailty measures based on clinical data exist for humans and several for rodent models of aging, there are fe...
Common genetic variants contribute to risk for complex human diseases. However, despite thousands of associations, variants modulating disease risk and their functional impact remain largely unknown. This includes SARS-CoV-2 infection, where outcomes...
Making robust and generalizable predictions within ecological systems such as forests remains challenging due to limited data availability and the slow pace of environmental change. To address this, we integrate a semi-empirical environmental process...
The spatial organization of the genome is dynamically shaped by chromatin-binding proteins, yet how protein-mediated three-dimensional (3D) architectures are specified across functional contexts remains incompletely understood. Here we present ChIANe...
Introduction Improving the efficiency and accuracy of annotation and extraction of performance data from mouse behavioural tasks will improve both the throughput and scientific value of preclinical research. Methods Here, we present and validate an a...
We introduce AI-BioMech, a deep learning based framework that directly predicts the mechanical response of cellular structures from 2D images, eliminating the need for manual geometry definition and traditional finite element simulations. The framewo...
Simultaneous measurement of chromatin, transcriptomic, and proteomic features in single cells opens new avenues for modeling interactions between molecular layers during dynamic biological processes. Predicting one modality from another - such as inf...
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