Harnessing collective structure knowledge in data augmentation for graph neural networks.

Journal: Neural networks : the official journal of the International Neural Network Society
PMID:

Abstract

Graph neural networks (GNNs) have achieved state-of-the-art performance in graph representation learning. Message passing neural networks, which learn representations through recursively aggregating information from each node and its neighbors, are among the most commonly-used GNNs. However, a wealth of structural information of individual nodes and full graphs is often ignored in such process, which restricts the expressive power of GNNs. Various graph data augmentation methods that enable the message passing with richer structure knowledge have been introduced as one main way to tackle this issue, but they are often focused on individual structure features and difficult to scale up with more structure features. In this work we propose a novel approach, namely collective structure knowledge-augmented graph neural network (CoS-GNN), in which a new message passing method is introduced to allow GNNs to harness a diverse set of node- and graph-level structure features, together with original node features/attributes, in augmented graphs. In doing so, our approach largely improves the structural knowledge modeling of GNNs in both node and graph levels, resulting in substantially improved graph representations. This is justified by extensive empirical results where CoS-GNN outperforms state-of-the-art models in various graph-level learning tasks, including graph classification, anomaly detection, and out-of-distribution generalization.

Authors

  • Rongrong Ma
    School of Mathematical Sciences, University of Chinese Academy of Sciences, Beijing, 100049, China. Electronic address: marongrong16@mails.ucas.ac.cn.
  • Guansong Pang
    Australian Institute for Machine Learning, The University of Adelaide, Adelaide, SA 5005, Australia.
  • Ling Chen
    Division of Biostatistics, Washington University School of Medicine, St. Louis, MO, United States.