MedFuseNet: fusing local and global deep feature representations with hybrid attention mechanisms for medical image segmentation.

Journal: Scientific reports
Published Date:

Abstract

Medical image segmentation plays a crucial role in addressing emerging healthcare challenges. Although several impressive deep learning architectures based on convolutional neural networks (CNNs) and Transformers have recently demonstrated remarkable performance, there is still potential for further performance improvement due to their inherent limitations in capturing feature correlations of input data. To address this issue, this paper proposes a novel encoder-decoder architecture called MedFuseNet that aims to fuse local and global deep feature representations with hybrid attention mechanisms for medical image segmentation. More specifically, the proposed approach contains two branches for feature learning in parallel: one leverages CNNs to learn local correlations of input data, and the other utilizes Swin-Transformer to capture global contextual correlations of input data. For feature fusion and enhancement, the designed hybrid attention mechanisms combine four different attention modules: (1) an atrous spatial pyramid pooling (ASPP) module for the CNN branch, (2) a cross attention module in the encoder for fusing local and global features, (3) an adaptive cross attention (ACA) module in skip connections for further performing fusion, and (4) a squeeze-and-excitation attention (SE-attention) module in the decoder for highlighting informative features. We evaluate our proposed approach on the public ACDC and Synapse datasets, and achieves the average DSC of 89.73% and 78.40%, respectively. Experimental results on these two datasets demonstrate the effectiveness of our proposed approach on medical image segmentation tasks, outperforming other used state-of-the-art approaches.

Authors

  • Ruiyuan Chen
    Beijing Chaoyang Hospital, Capital Medical University, Beijing, China.
  • Saiqi He
    Hengyang Central Hospital, Hengyang, Hunan, 421000, China.
  • Junjie Xie
    School of Computer Science and Engineering, Sun Yat-sen University, Guangzhou, 510000, China.
  • Tao Wang
    Department of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China.
  • Yingying Xu
    Division of General and Community Pediatrics, Cincinnati Children's Hospital Medical Center, 3333 Burnet Ave, Cincinnati, OH, 45229, USA.
  • Jiangxiong Fang
    Institute of Intelligent Information Processing, Taizhou University, Taizhou, 318000, Zhejiang, China. Electronic address: fangchj202@163.com.
  • Xiaoming Zhao
    School of Electronic and Information Engineering, Taizhou University, Taizhou 318000, China.
  • Shiqing Zhang
    Institute of Intelligent Information Processing, Taizhou University, Taizhou, 318000, Zhejiang, China.
  • Guoyu Wang
    Department of Philosophy, Dalian University of Technology, Dalian, 116024, China.
  • Hongsheng Lu
    Taizhou Central Hospital (Taizhou University Hospital), Taizhou University, Taizhou, 318000, China.
  • Zhaohui Yang