Crystal Structure Prediction Using a Self-Attention Neural Network and Semantic Segmentation.

Journal: Journal of chemical information and modeling
PMID:

Abstract

The development of new materials is a time-consuming and resource-intensive process. Deep learning has emerged as a promising approach to accelerate this process. However, accurately predicting crystal structures using deep learning remains a significant challenge due to the complex, high-dimensional nature of atomic interactions and the scarcity of comprehensive training data that captures the full diversity of possible crystal configurations. This work developed a neural network model based on a data set comprising thousands of crystallographic information files from existing crystal structure databases. The model incorporates a self-attention mechanism to enhance prediction accuracy by learning and extracting both local and global features of three-dimensional structures, treating the atoms in each crystal as point sets. This approach enables effective semantic segmentation and accurate unit cell prediction. Experimental results demonstrate that for unit cells containing up to 500 atoms, the model achieves a structure prediction accuracy of 89.78%.

Authors

  • Wuling Zhao
    State Key Laboratory of Pulp and Paper Engineering, South China University of Technology, Guangzhou 510640, China.
  • Minxia Zhou
    State Key Laboratory of Pulp and Paper Engineering, South China University of Technology, Guangzhou 510640, China.
  • Jialin Shao
    State Key Laboratory of Pulp and Paper Engineering, South China University of Technology, Guangzhou 510640, China.
  • Jingzheng Ren
    Department of Industrial and Systems Engineering, The Hong Kong Polytechnic University, Hong Kong SAR, China. Electronic address: jzhren@polyu.edu.hk.
  • Yusha Hu
    Department of Industrial and Systems Engineering, The Hong Kong Polytechnic University, Hong Kong SAR, China.
  • Yulin Han
    State Key Laboratory of Pulp and Paper Engineering, South China University of Technology, Guangzhou 510640, China.
  • Yi Man
    State Key Laboratory of Pulp and Paper Engineering, South China University of Technology, Guangzhou 510640, China.