Scalable Multi-FPGA HPC Architecture for Associative Memory System.

Journal: IEEE transactions on biomedical circuits and systems
PMID:

Abstract

Associative memory is a cornerstone of cognitive intelligence within the human brain. The Bayesian confidence propagation neural network (BCPNN), a cortex-inspired model with high biological plausibility, has proven effective in emulating high-level cognitive functions like associative memory. However, the current approach using GPUs to simulate BCPNN-based associative memory tasks encounters challenges in latency and power efficiency as the model size scales. This work proposes a scalable multi-FPGA high performance computing (HPC) architecture designed for the associative memory system. The architecture integrates a set of hypercolumn unit (HCU) computing cores for intra-board online learning and inference, along with a spike-based synchronization scheme for inter-board communication among multiple FPGAs. Several design strategies, including population-based model mapping, packet-based spike synchronization, and cluster-based timing optimization, are presented to facilitate the multi-FPGA implementation. The architecture is implemented and validated on two Xilinx Alveo U50 FPGA cards, achieving a maximum model size of 20010 and a peak working frequency of 220 MHz for the associative memory system. Both the memory-bounded spatial scalability and compute-bounded temporal scalability of the architecture are evaluated and optimized, achieving a maximum scale-latency ratio (SLR) of 268.82 for the two-FPGA implementation. Compared to a two-GPU counterpart, the two-FPGA approach demonstrates a maximum latency reduction of 51.72 and a power reduction exceeding 5.28 under the same network configuration. Compared with the state-of-the-art works, the two-FPGA implementation exhibits a high pattern storage capacity for the associative memory task.

Authors

  • Deyu Wang
    Department of Pathology, The Third Affiliated Hospital, Sun Yat-sen University, Guangzhou, China.
  • Xiaoze Yan
  • Yu Yang
    Department of Obstetrics & Gynecology, the First Affiliated Hospital of Xi'an Jiaotong University, Xian, Shaanxi, China.
  • Dimitrios Stathis
  • Ahmed Hemani
  • Anders Lansner
    Department of Numerical Analysis and Computer Science, Stockholm University Stockholm, Sweden ; Department of Computational Biology, School of Computer Science and Communication, Royal Institute of Technology (KTH) Stockholm, Sweden.
  • Jiawei Xu
  • Li-Rong Zheng
  • Zhuo Zou