XCAT 3.0: A comprehensive library of personalized digital twins derived from CT scans.

Journal: Medical image analysis
Published Date:

Abstract

Virtual Imaging Trials (VIT) offer a cost-effective and scalable approach for evaluating medical imaging technologies. Computational phantoms, which mimic real patient anatomy and physiology, play a central role in VITs. However, the current libraries of computational phantoms face limitations, particularly in terms of sample size and heterogeneity. Insufficient representation of the population hampers accurate assessment of imaging technologies across different patient groups. Traditionally, the more realistic computational phantoms were created by manual segmentation, which is a laborious and time-consuming task, impeding the expansion of phantom libraries. This study presents a framework for creating realistic computational phantoms using a suite of automatic segmentation models and performing three forms of automated quality control on the segmented organ masks. The result is the release of over 2500 new XCAT 3 generation of computational phantoms. This new formation embodies 140 structures and represents a comprehensive approach to detailed anatomical modeling. The developed computational phantoms are formatted in both voxelized and surface mesh formats. The framework is combined with an in-house CT scanner simulator to produce realistic CT images. The framework has the potential to advance virtual imaging trials, facilitating comprehensive and reliable evaluations of medical imaging technologies. Phantoms may be requested at https://cvit.duke.edu/resources/. Code, model weights, and sample CT images are available at https://xcat-3.github.io/.

Authors

  • Lavsen Dahal
    Center for Virtual Imaging Trials, Carl E. Ravin Advanced Imaging Laboratories, Department of Radiology, Duke University School of Medicine, Durham, NC, 27708, USA; Electrical and Computer Engineering, Pratt School of Engineering, Duke University, Durham, NC, 27708, USA. Electronic address: lavsen.dahal@gmail.com.
  • Mobina Ghojoghnejad
    Center for Virtual Imaging Trials, Carl E. Ravin Advanced Imaging Laboratories, Department of Radiology, Duke University School of Medicine, Durham, NC, 27708, USA.
  • Liesbeth Vancoillie
    Center for Virtual Imaging Trials, Carl E. Ravin Advanced Imaging Laboratories, Department of Radiology, Duke University School of Medicine, Durham, NC, 27708, USA.
  • Dhrubajyoti Ghosh
    Center for Virtual Imaging Trials, Carl E. Ravin Advanced Imaging Laboratories, Department of Radiology, Duke University School of Medicine, Durham, NC, 27708, USA; Department of Biostatistics & Bioinformatics, Duke University School of Medicine, Durham, NC, 27708, USA.
  • Yubraj Bhandari
    Center for Virtual Imaging Trials, Carl E. Ravin Advanced Imaging Laboratories, Department of Radiology, Duke University School of Medicine, Durham, NC, 27708, USA.
  • David Kim
    Department of Biochemistry, University of Washington, Seattle, WA 98105.
  • Fong Chi Ho
    Center for Virtual Imaging Trials, Carl E. Ravin Advanced Imaging Laboratories, Department of Radiology, Duke University School of Medicine, Durham, NC, 27708, USA; Electrical and Computer Engineering, Pratt School of Engineering, Duke University, Durham, NC, 27708, USA.
  • Fakrul Islam Tushar
    Center for Virtual Imaging Trials, Carl E. Ravin Advanced Imaging Laboratories, Department of Radiology, Duke University School of Medicine, 2424 Erwin Rd. Ste. 302, Durham, NC, 27705, USA.
  • Sheng Luo
    Department of Biostatistics and Bioinformatics, Duke University Medical Center, Durham, North Carolina, USA.
  • Kyle J Lafata
    Department of Radiology, Duke University School of Medicine, Durham, NC, USA. kyle.lafata@duke.edu.
  • Ehsan Abadi
  • Ehsan Samei
    Carl E. Ravin Advanced Imaging Laboratories, Department of Radiology, Duke University Medical Center, 2424 Erwin Road, Suite 302, Durham, NC, 27705, USA.
  • Joseph Y Lo
    Carl E. Ravin Advanced Imaging Laboratories, Department of Radiology, Duke University School of Medicine, Durham, North Carolina.
  • W Paul Segars
    Center for Virtual Imaging Trials, Carl E. Ravin Advanced Imaging Laboratories, Department of Radiology, Duke University School of Medicine, Durham, NC, 27708, USA.