A Prediction Model for Membrane Proteins Using Moments Based Features.

Journal: BioMed research international
Published Date:

Abstract

The most expedient unit of the human body is its cell. Encapsulated within the cell are many infinitesimal entities and molecules which are protected by a cell membrane. The proteins that are associated with this lipid based bilayer cell membrane are known as membrane proteins and are considered to play a significant role. These membrane proteins exhibit their effect in cellular activities inside and outside of the cell. According to the scientists in pharmaceutical organizations, these membrane proteins perform key task in drug interactions. In this study, a technique is presented that is based on various computationally intelligent methods used for the prediction of membrane protein without the experimental use of mass spectrometry. Statistical moments were used to extract features and furthermore a Multilayer Neural Network was trained using backpropagation for the prediction of membrane proteins. Results show that the proposed technique performs better than existing methodologies.

Authors

  • Ahmad Hassan Butt
    Department of Computer Science, School of Systems and Technology, University of Management and Technology, P.O. Box 10033, C-II, Johar Town, Lahore 54770, Pakistan.
  • Sher Afzal Khan
    Faculty of Computing and Information Technology in Rabigh, King Abdul Aziz University, Saudi Arabia.
  • Hamza Jamil
    Department of Computer Science, School of Systems and Technology, University of Management and Technology, P.O. Box 10033, C-II, Johar Town, Lahore 54770, Pakistan.
  • Nouman Rasool
    Department of Chemistry, School of Science, University of Management and Technology, P.O. Box 10033, C-II, Johar Town, Lahore 54770, Pakistan.
  • Yaser Daanial Khan
    Department of Computer Science, School of Systems and Technology, University of Management and Technology, P.O. Box 10033, C-II, Johar Town, Lahore 54770, Pakistan.