Paraconsistents artificial neural networks applied to the study of mutational patterns of the F subtype of the viral strains of HIV-1 to antiretroviral therapy.

Journal: Anais da Academia Brasileira de Ciencias
PMID:

Abstract

The high variability of HIV-1 as well as the lack of efficient repair mechanisms during the stages of viral replication, contribute to the rapid emergence of HIV-1 strains resistant to antiretroviral drugs. The selective pressure exerted by the drug leads to fixation of mutations capable of imparting varying degrees of resistance. The presence of these mutations is one of the most important factors in the failure of therapeutic response to medications. Thus, it is of critical to understand the resistance patterns and mechanisms associated with them, allowing the choice of an appropriate therapeutic scheme, which considers the frequency, and other characteristics of mutations. Utilizing Paraconsistents Artificial Neural Networks, seated in Paraconsistent Annotated Logic Et which has the capability of measuring uncertainties and inconsistencies, we have achieved levels of agreement above 90% when compared to the methodology proposed with the current methodology used to classify HIV-1 subtypes. The results demonstrate that Paraconsistents Artificial Neural Networks can serve as a promising tool of analysis.

Authors

  • Paulo C C dos Santos
    Instituto Oscar Freire - Medicina Legal, Faculdade de Medicina, Universidade de São Paulo, São Paulo, SP, Brazil.
  • Helder F S Lopes
    Instituto de Estudos Avançados, Universidade de São Paulo, São Paulo, SP, Brazil.
  • Rosana Alcalde
    Laboratório de Investigação Médica em Dermatologia e Imunodeficiência, Faculdade de Medicina, Universidade de São Paulo, São Paulo, SP, Brazil.
  • Cláudio R Gonsalez
    Laboratório de Investigação Médica em Dermatologia e Imunodeficiência, Faculdade de Medicina, Universidade de São Paulo, São Paulo, SP, Brazil.
  • Jair M Abe
    Instituto de Estudos Avançados, Universidade de São Paulo, São Paulo, SP, Brazil.
  • Luis F Lopez
    Instituto Oscar Freire - Medicina Legal, Faculdade de Medicina, Universidade de São Paulo, São Paulo, SP, Brazil.