Classifying publications from the clinical and translational science award program along the translational research spectrum: a machine learning approach.

Journal: Journal of translational medicine
Published Date:

Abstract

BACKGROUND: Translational research is a key area of focus of the National Institutes of Health (NIH), as demonstrated by the substantial investment in the Clinical and Translational Science Award (CTSA) program. The goal of the CTSA program is to accelerate the translation of discoveries from the bench to the bedside and into communities. Different classification systems have been used to capture the spectrum of basic to clinical to population health research, with substantial differences in the number of categories and their definitions. Evaluation of the effectiveness of the CTSA program and of translational research in general is hampered by the lack of rigor in these definitions and their application. This study adds rigor to the classification process by creating a checklist to evaluate publications across the translational spectrum and operationalizes these classifications by building machine learning-based text classifiers to categorize these publications.

Authors

  • Alisa Surkis
    Health Sciences Library, NYU School of Medicine, New York, USA. alisa.surkis@med.nyu.edu.
  • Janice A Hogle
    Institute for Clinical and Translational Research, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, USA.
  • Deborah DiazGranados
    School of Medicine, Virginia Commonwealth University, Richmond, USA.
  • Joe D Hunt
    Indiana Clinical and Translational Sciences Institute, Indiana University School of Medicine, Indianapolis, USA.
  • Paul E Mazmanian
    School of Medicine, Virginia Commonwealth University, Richmond, USA.
  • Emily Connors
    Clinical and Translational Science Institute, Medical College of Wisconsin, Milwaukee, USA.
  • Kate Westaby
    Wisconsin Partnership Program, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, USA.
  • Elizabeth C Whipple
    Ruth Lilly Medical Library, Indiana University School of Medicine, Indianapolis, USA.
  • Trisha Adamus
    Ebling Library for the Health Sciences, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, USA.
  • Meridith Mueller
    Population Health Sciences, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, USA.
  • Yindalon Aphinyanaphongs
    Department of Population Health, New York University, New York.