Human-level Performance On Automatic Head Biometrics In Fetal Ultrasound Using Fully Convolutional Neural Networks.

Journal: Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
Published Date:

Abstract

Measurement of head biometrics from fetal ultrasonography images is of key importance in monitoring the healthy development of fetuses. However, the accurate measurement of relevant anatomical structures is subject to large inter-observer variability in the clinic. To address this issue, an automated method utilizing Fully Convolutional Networks (FCN) is proposed to determine measurements of fetal head circumference (HC) and biparietal diameter (BPD). An FCN was trained on approximately 2000 2D ultrasound images of the head with annotations provided by 45 different sonographers during routine screening examinations to perform semantic segmentation of the head. An ellipse is fitted to the resulting segmentation contours to mimic the annotation typically produced by a sonographer. The model's performance was compared with inter-observer variability, where two experts manually annotated 100 test images. Mean absolute model-expert error was slightly better than inter-observer error for HC (1.99mm vs 2.16mm), and comparable for BPD (0.61mm vs 0.59mm), as well as Dice coefficient (0.980 vs 0.980). Our results demonstrate that the model performs at a level similar to a human expert, and learns to produce accurate predictions from a large dataset annotated by many sonographers. Additionally, measurements are generated in near real-time at 15fps on a GPU, which could speed up clinical workflow for both skilled and trainee sonographers.

Authors

  • Matthew Sinclair
    Division of Imaging Sciences and Biomedical Engineering, King's College London, London, United Kingdom.
  • Christian F Baumgartner
  • Jacqueline Matthew
  • Wenjia Bai
    Department of Computing Imperial College London London UK.
  • Juan Cerrolaza Martinez
  • Yuanwei Li
  • Sandra Smith
  • Caroline L Knight
    Centre of Excellence in Personalised Healthcare, Institute of Biomedical Engineering, Department of Engineering Science, University of Oxford, Old Road Campus Research Building, Headington, OX3 7DQ Oxford, UK; Nuffield Department of Obstetrics & Gynaecology, University of Oxford, Oxford, U.K.
  • Bernhard Kainz
    Biomedical Image Analysis (BioMedIA) Group, Department of Computing, Imperial College London, UK.
  • Jo Hajnal
  • Andrew P King
    Division of Imaging Sciences and Biomedical Engineering, King's College London, London, United Kingdom. Electronic address: andrew.king@kcl.ac.uk.
  • Daniel Rueckert
    Biomedical Image Analysis (BioMedIA) Group, Department of Computing, Imperial College London, UK. Electronic address: d.rueckert@imperial.ac.uk.