Robust Closed-Loop Control of a Cursor in a Person with Tetraplegia using Gaussian Process Regression.

Journal: Neural computation
Published Date:

Abstract

Intracortical brain computer interfaces can enable individuals with paralysis to control external devices through voluntarily modulated brain activity. Decoding quality has been previously shown to degrade with signal nonstationarities-specifically, the changes in the statistics of the data between training and testing data sets. This includes changes to the neural tuning profiles and baseline shifts in firing rates of recorded neurons, as well as nonphysiological noise. While progress has been made toward providing long-term user control via decoder recalibration, relatively little work has been dedicated to making the decoding algorithm more resilient to signal nonstationarities. Here, we describe how principled kernel selection with gaussian process regression can be used within a Bayesian filtering framework to mitigate the effects of commonly encountered nonstationarities. Given a supervised training set of (neural features, intention to move in a direction)-pairs, we use gaussian process regression to predict the intention given the neural data. We apply kernel embedding for each neural feature with the standard radial basis function. The multiple kernels are then summed together across each neural dimension, which allows the kernel to effectively ignore large differences that occur only in a single feature. The summed kernel is used for real-time predictions of the posterior mean and variance under a gaussian process framework. The predictions are then filtered using the discriminative Kalman filter to produce an estimate of the neural intention given the history of neural data. We refer to the multiple kernel approach combined with the discriminative Kalman filter as the MK-DKF. We found that the MK-DKF decoder was more resilient to nonstationarities frequently encountered in-real world settings yet provided similar performance to the currently used Kalman decoder. These results demonstrate a method by which neural decoding can be made more resistant to nonstationarities.

Authors

  • David M Brandman
    Neuroscience Graduate Program, Department of Neuroscience, Carney Institute for Brain Science, and School of Engineering, Brown University, Providence, RI 02912, U.S.A.; and Department of Surgery (Neurosurgery), Dalhousie University, Halifax, NS B3H 347 Canada david_brandman@brown.edu.
  • Michael C Burkhart
    Division of Applied Mathematics, Brown University, Providence, RI 02912, U.S.A. michael_burkhart@alumnibrown.edu.
  • Jessica Kelemen
    Center for Neurotechnology and Neurorecovery, Neurology, Massachusetts General Hospital, Boston, MA 02114, U.S.A. jkelemen@mgh.harvard.edu.
  • Brian Franco
    Center for Neurotechnology and Neurorecovery, Neurology, Massachusetts General Hospital, Boston, MA 02114, U.S.A. brfranco34@gmail.com.
  • Matthew T Harrison
    Division of Applied Mathematics, Brown University, Providence, RI 02912, U.S.A. matthew_harrison@brown.edu.
  • Leigh R Hochberg
    Center for Neurorestoration and Neurotechnology, Rehabilitation R&D Service, Department of Veterans Affairs Medical Center, Providence, RI 02908; Carney Institute for Brain Science and School of Engineering, Brown University, Providence, RI 02912; Center for Neurotechnology and Neurorecovery, Neurology, Massachusetts General Hospital, Boston, MA 02114; and Neurology, Harvard Medical School, Boston, MA 02115, U.S.A. leigh_hochberg@brown.edu.