Biomedical semantic indexing by deep neural network with multi-task learning.

Journal: BMC bioinformatics
PMID:

Abstract

BACKGROUND: Biomedical semantic indexing is important for information retrieval and many other research fields in bioinformatics. It annotates biomedical citations with Medical Subject Headings. In face of unbalanced category distribution in the training data, sampling methods are difficult to apply for semantic indexing task.

Authors

  • Yongping Du
    Faculty of Information Technology, Beijing University of Technology, Beijing, China.
  • Yunpeng Pan
    Faculty of Information Technology, Beijing University of Technology, Beijing, China. pypmemorypool@gmail.com.
  • Chencheng Wang
    Faculty of Information Technology, Beijing University of Technology, Beijing, China.
  • Junzhong Ji
    Faculty of Information Technology, Beijing University of Technology, Beijing, China.