Survey of Machine Learning Techniques for Prediction of the Isoform Specificity of Cytochrome P450 Substrates.

Journal: Current drug metabolism
Published Date:

Abstract

BACKGROUND: Determination or prediction of the Absorption, Distribution, Metabolism, and Excretion (ADME) properties of drug candidates and drug-induced toxicity plays crucial roles in drug discovery and development. Metabolism is one of the most complicated pharmacokinetic properties to be understood and predicted. However, experimental determination of the substrate binding, selectivity, sites and rates of metabolism is time- and recourse- consuming. In the phase I metabolism of foreign compounds (i.e., most of drugs), cytochrome P450 enzymes play a key role. To help develop drugs with proper ADME properties, computational models are highly desired to predict the ADME properties of drug candidates, particularly for drugs binding to cytochrome P450.

Authors

  • Yi Xiong
    Departement of Medical Oncology, Lung Cancer and Gastrointestinal Unit, Hunan Cancer Hospital/Affiliated Cancer Hospital of Xiangya School of Medicine, Changsha 410013, China.
  • Yanhua Qiao
    College of Public Health, Affiliated Hospital of Hebei University, Hebei University, Baoding, 071000, Hebei, People's Republic of China. jab@hbu.edu.cn.
  • Daisuke Kihara
    Department of Computer Science and Department of Biological Science, Purdue University, West Lafayette, IN 47907, USA Department of Computer Science and Department of Biological Science, Purdue University, West Lafayette, IN 47907, USA.
  • Hui-Yuan Zhang
    State Key Laboratory of Microbial Metabolism, and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China.
  • Xiaolei Zhu
    School of Information and Artificial Intelligence, Anhui Agricultural University, Hefei, Anhui, China.
  • Dong-Qing Wei