Deep Learning Method for Mandibular Canal Segmentation in Dental Cone Beam Computed Tomography Volumes.

Journal: Scientific reports
Published Date:

Abstract

Accurate localisation of mandibular canals in lower jaws is important in dental implantology, in which the implant position and dimensions are currently determined manually from 3D CT images by medical experts to avoid damaging the mandibular nerve inside the canal. Here we present a deep learning system for automatic localisation of the mandibular canals by applying a fully convolutional neural network segmentation on clinically diverse dataset of 637 cone beam CT volumes, with mandibular canals being coarsely annotated by radiologists, and using a dataset of 15 volumes with accurate voxel-level mandibular canal annotations for model evaluation. We show that our deep learning model, trained on the coarsely annotated volumes, localises mandibular canals of the voxel-level annotated set, highly accurately with the mean curve distance and average symmetric surface distance being 0.56 mm and 0.45 mm, respectively. These unparalleled accurate results highlight that deep learning integrated into dental implantology workflow could significantly reduce manual labour in mandibular canal annotations.

Authors

  • Joel Jaskari
    Dept. of Computer Science, Aalto University School of Science, Espoo, 00076, Finland.
  • Jaakko Sahlsten
    Dept. of Computer Science, Aalto University School of Science, Espoo, 00076, Finland.
  • Jorma Järnstedt
    Medical Imaging Centre, Department of Radiology Tampere University Hospital, Teiskontie 35, 33520, Tampere, Finland.
  • Helena Mehtonen
    Medical Imaging Centre, Department of Radiology Tampere University Hospital, Teiskontie 35, 33520, Tampere, Finland.
  • Kalle Karhu
    Planmeca Oy, Asentajankatu 6, 00880, Helsinki, Finland.
  • Osku Sundqvist
    Planmeca Oy, Asentajankatu 6, 00880, Helsinki, Finland.
  • Ari Hietanen
    Planmeca Oy, Asentajankatu 6, 00880, Helsinki, Finland.
  • Vesa Varjonen
    Planmeca Oy, Asentajankatu 6, 00880, Helsinki, Finland.
  • Vesa Mattila
    Planmeca Oy, Asentajankatu 6, 00880, Helsinki, Finland.
  • Kimmo Kaski
    Dept. of Computer Science, Aalto University School of Science, Espoo, 00076, Finland. kimmo.kaski@aalto.fi.