Efficient prediction of drug-drug interaction using deep learning models.

Journal: IET systems biology
Published Date:

Abstract

A drug-drug interaction or drug synergy is extensively utilised for cancer treatment. However, prediction of drug-drug interaction is defined as an ill-posed problem, because manual testing is only implementable on small group of drugs. Predicting the drug-drug interaction score has been a popular research topic recently. Recently many machine learning models have proposed in the literature to predict the drug-drug interaction score efficiently. However, these models suffer from the over-fitting issue. Therefore, these models are not so-effective for predicting the drug-drug interaction score. In this work, an integrated convolutional mixture density recurrent neural network is proposed and implemented. The proposed model integrates convolutional neural networks, recurrent neural networks and mixture density networks. Extensive comparative analysis reveals that the proposed model significantly outperforms the competitive models.

Authors

  • Prashant Kumar Shukla
    Department of Computer Science and Engineering, School of Engineering & Technology, Jagran Lake City University (JLU), Bhopal, MP, India.
  • Piyush Kumar Shukla
    Department of Computer Science and Engineering, University Institute of Technology, RGPV, Bhopal, MP, India.
  • Poonam Sharma
    2Nexgen Precision, Dallas, TX.
  • Paresh Rawat
    Department of Electronics and Communication Engineering, Sagar Institute of Science & Technology (SISTec), Gandhi Nagar, Bhopal, MP, India.
  • Jashwant Samar
    Department of Computer Science and Engineering, University Institute of Technology, RGPV, Bhopal, MP, India.
  • Rahul Moriwal
    Department of Computer Science and Engineering-AITR Indore, MP, India.
  • Manjit Kaur
    Computer and Communication Engineering Department, School of Computing and Information Technology, Manipal University Jaipur, Jaipur, India. Manjit.kr@yahoo.com.