DeeplyEssential: a deep neural network for predicting essential genes in microbes.

Journal: BMC bioinformatics

Published Date: Sep 30, 2020

Abstract

BACKGROUND: Essential genes are those genes that are critical for the survival of an organism. The prediction of essential genes in bacteria can provide targets for the design of novel antibiotic compounds or antimicrobial strategies.

Authors

Md Abid Hasan

Department of Computer Science and Engineering, University of California Riverside, 900 University Ave, Riverside, 92507, CA, USA. mhasa006@ucr.edu.
Stefano Lonardi

Computer Science and Engineering, University of California, Riverside, Riverside, 92521, CA, USA. stelo@cs.ucr.edu.

Keywords

Area Under Curve Bacteria Cluster Analysis Codon Genes, Essential Gram-Negative Bacteria Gram-Positive Bacteria Neural Networks, Computer ROC Curve

External Resources

View on PubMed Access via DOI PubMed (32998698)

DeeplyEssential: a deep neural network for predicting essential genes in microbes.

Abstract

Authors

Keywords

External Resources

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