Validation of a Whole Heart Segmentation from Computed Tomography Imaging Using a Deep-Learning Approach.

Journal: Journal of cardiovascular translational research
Published Date:

Abstract

The aim of this study is to develop an automated deep-learning-based whole heart segmentation of ECG-gated computed tomography data. After 21 exclusions, CT acquired before transcatheter aortic valve implantation in 71 patients were reviewed and randomly split in a training (n = 55 patients), validation (n = 8 patients), and a test set (n = 8 patients). A fully automatic deep-learning method combining two convolutional neural networks performed segmentation of 10 cardiovascular structures, which was compared with the manually segmented reference by the Dice index. Correlations and agreement between myocardial volumes and mass were assessed. The algorithm demonstrated high accuracy (Dice score = 0.920; interquartile range: 0.906-0.925) and a low computing time (13.4 s, range 11.9-14.9). Correlations and agreement of volumes and mass were satisfactory for most structures. Six of ten structures were well segmented. Deep-learning-based method allowed automated WHS from ECG-gated CT data with a high accuracy. Challenges remain to improve right-sided structures segmentation and achieve daily clinical application.

Authors

  • Sam Sharobeem
    LTSI - UMR 1099, Inserm, CHU Rennes, Univ Rennes, 35000, Rennes, France.
  • Hervé Le Breton
    LTSI - UMR 1099, Inserm, CHU Rennes, Univ Rennes, 35000, Rennes, France.
  • Florent Lalys
    Therenva, Rennes, France.
  • Mathieu Lederlin
    Department of Radiology, CHU Rennes, 35000 Rennes, France.
  • Clément Lagorce
    Therenva, Rennes, France.
  • Marc Bedossa
    Service de Cardiologie, CHU Rennes, 35000, Rennes, France.
  • Dominique Boulmier
    LTSI - UMR 1099, Inserm, CHU Rennes, Univ Rennes, 35000, Rennes, France.
  • Guillaume Leurent
    Service de Cardiologie, CHU Rennes, 35000, Rennes, France.
  • Pascal Haigron
    LTSI - UMR 1099, Inserm, CHU Rennes, Univ Rennes, 35000, Rennes, France.
  • Vincent Auffret
    LTSI - UMR 1099, Inserm, CHU Rennes, Univ Rennes, 35000, Rennes, France. vincent.auffret@chu-rennes.fr.