A Novel Encoding and Decoding Calibration Guiding Pathway for Pathological Image Analysis.

Journal: IEEE/ACM transactions on computational biology and bioinformatics
Published Date:

Abstract

Diagnostic pathology is the foundation and gold standard for identifying carcinomas, and the accurate quantification of pathological images can provide objective clues for pathologists to make more convincing diagnosis. Recently, the encoder-decoder architectures (EDAs) of convolutional neural networks (CNNs) are widely used in the analysis of pathological images. Despite the rapid innovation of EDAs, we have conducted extensive experiments based on a variety of commonly used EDAs, and found them cannot handle the interference of complex background in pathological images, making the architectures unable to focus on the regions of interest (RoIs), thus making the quantitative results unreliable. Therefore, we proposed a pathway named GLobal Bank (GLB) to guide the encoder and the decoder to extract more features of RoIs rather than the complex background. Sufficient experiments have proved that the architecture remoulded by GLB can achieve significant performance improvement, and the quantitative results are more accurate.

Authors

  • Hansheng Li
    School of Information Science and Technology, Northwest University, Xi'an, Shaanxi, China.
  • Jianping Li
    College of Chemistry and Bioengineering, Guilin University of Technology, Guilin, 541004, China.
  • Yuxin Kang
  • Chunbao Wang
    Department of Pathology, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi, China.
  • Feihong Liu
    Department of Information Science and Technology, Northwest University, Xi'an 710127, China.
  • Wenli Hui
  • Qirong Bo
  • Lei Cui
    School of Information Science and Technology, Northwest University, Xi'an, Shaanxi, China.
  • Jun Feng
    Linping Hospital of Integrated Traditional Chinese and Western, Medicine, Hangzhou, Zhejiang, China.
  • Lin Yang
    National Clinical Research Center for Metabolic Diseases, Key Laboratory of Diabetes Immunology (Central South University), Ministry of Education, and Department of Metabolism and Endocrinology, The Second Xiangya Hospital of Central South University, Changsha, China.