Neural Network for Principle of Least Action.

Journal: Journal of chemical information and modeling
PMID:

Abstract

The principle of least action is the cornerstone of classical mechanics, theory of relativity, quantum mechanics, and thermodynamics. Here, we describe how a neural network (NN) learns to find the trajectory for a Lennard-Jones (LJ) system that maintains balance in minimizing the Onsager-Machlup (OM) action and maintaining the energy conservation. The phase-space trajectory thus calculated is in excellent agreement with the corresponding results from the "ground-truth" molecular dynamics (MD) simulation. Furthermore, we show that the NN can easily find structural transformation pathways for LJ clusters, for example, the basin-hopping transformation of an LJ from an incomplete Mackay icosahedron to a truncated face-centered cubic octahedron. Unlike MD, the NN computes atomic trajectories over the entire temporal domain in one fell swoop, and the NN time step is a factor of 20 larger than the MD time step. The NN approach to OM action is quite general and can be adapted to model morphometrics in a variety of applications.

Authors

  • Beibei Wang
    School of Control and Mechanical Engineering, Tianjin Chengjian University, Tianjin 300384, China.
  • Shane Jackson
    Collaboratory for Advanced Computing and Simulations, University of Southern California, Los Angeles, California 90089, United States.
  • Aiichiro Nakano
    Collaboratory of Advanced Computing and Simulations, Department of Computer Science, Department of Physics & Astronomy, Department of Chemical Engineering & Materials Science, and Department of Biological Sciences, University of Southern California, Los Angeles, California 90089, United States.
  • Ken-Ichi Nomura
    Collaboratory of Advanced Computing and Simulations, Department of Computer Science, Department of Physics & Astronomy, Department of Chemical Engineering & Materials Science, and Department of Biological Sciences, University of Southern California, Los Angeles, California 90089, United States.
  • Priya Vashishta
    Collaboratory of Advanced Computing and Simulations, Department of Computer Science, Department of Physics & Astronomy, Department of Chemical Engineering & Materials Science, and Department of Biological Sciences, University of Southern California, Los Angeles, California 90089, United States.
  • Rajiv Kalia
    Collaboratory for Advanced Computing and Simulations, University of Southern California, Los Angeles, California 90089, United States.
  • Mark Stevens
    Department of Radiation Oncology, Northern Sydney Cancer Centre, Royal North Shore Hospital, Reserve Road, St Leonards, NSW, Australia.