Multi-omic integration by machine learning (MIMaL).

Journal: Bioinformatics (Oxford, England)
PMID:

Abstract

MOTIVATION: Cells respond to environments by regulating gene expression to exploit resources optimally. Recent advances in technologies allow for measuring the abundances of RNA, proteins, lipids and metabolites. These highly complex datasets reflect the states of the different layers in a biological system. Multi-omics is the integration of these disparate methods and data to gain a clearer picture of the biological state. Multi-omic studies of the proteome and metabolome are becoming more common as mass spectrometry technology continues to be democratized. However, knowledge extraction through the integration of these data remains challenging.

Authors

  • Quinn Dickinson
    Department of Biochemistry, Medical College of Wisconsin, Milwaukee, Wisconsin.
  • Andreas Aufschnaiter
    Department of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.
  • Martin Ott
    Department of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.
  • Jesse G Meyer
    Department of Biochemistry, Medical College of Wisconsin, Milwaukee, WI 53226, USA.