Fungal names: a comprehensive nomenclatural repository and knowledge base for fungal taxonomy.

Journal: Nucleic acids research
Published Date:

Abstract

Fungal taxonomy is a complex and rapidly changing subject, which makes proper naming of fungi challenging for taxonomists. A registration platform with a standardized and information-integrated database is a powerful tool for efficient research on fungal taxonomy. Fungal Names (FN, https://nmdc.cn/fungalnames/; launched in 2011) is one of the three official fungal nomenclatural repositories authorized by the International Nomenclature Committee for Fungi (NCF). Currently, FN includes >567 000 taxon names from >10 000 related journals and books published since 1596 and covers >147 000 collection records of type specimens/illustrations from >5000 preserving agencies. FN is also a knowledge base that integrates nomenclature information with specimens, culture collections and herbaria/fungaria, publications and taxonomists, and represents a summary of the history and recent advances in fungal taxonomy. Published fungal names are categorized based on well-accepted nomenclature rules and can be readily searched with different keywords and strategies. In combination with a standardized name checking tool and a sequence alignment-based identification package, FN makes the registration and typification of nomenclatural novelties of fungi convenient and accurate.

Authors

  • Fang Wang
    Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education and Hunan Key Laboratory for Computation and Simulation in Science and Engineering, Xiangtan University, Xiangtan, China.
  • Ke Wang
    China Electric Power Research Institute, Haidian District, Beijing 100192, China. wangke1@epri.sgcc.com.cn.
  • Lei Cai
    Department of Information Science and Technology, Beijing University of Chemical Technology, Beijing, People's Republic of China.
  • Mingjun Zhao
    State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, BeijingĀ 100101, China.
  • Paul M Kirk
    Jodrell Laboratory, Royal Botanical Gardens, Kew, Richmond, Surrey TW9 3DS, UK.
  • Guomei Fan
    Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China.
  • Qinglan Sun
    Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China.
  • Bo Li
    Electric Power Research Institute, Yunnan Power Grid Co., Ltd., Kunming, Yunnan, China.
  • Shuai Wang
    Department of Intensive Care Unit, China-Japan Union Hospital of Jilin University, Changchun, China.
  • Zhengfei Yu
    Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China.
  • Dong Han
    Department of Radiology, Affiliated Hospital of Chengde Medical College, Chengde Hebei, 067000, P.R.China.
  • Juncai Ma
    Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China.
  • Linhuan Wu
    Microbial Resource and Big Data Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China.
  • Yijian Yao
    State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, BeijingĀ 100101, China.