Automated in-depth cerebral arterial labelling using cerebrovascular vasculature reframing and deep neural networks.

Journal: Scientific reports
PMID:

Abstract

Identifying the cerebral arterial branches is essential for undertaking a computational approach to cerebrovascular imaging. However, the complexity and inter-individual differences involved in this process have not been thoroughly studied. We used machine learning to examine the anatomical profile of the cerebral arterial tree. The method is less sensitive to inter-subject and cohort-wise anatomical variations and exhibits robust performance with an unprecedented in-depth vessel range. We applied machine learning algorithms to disease-free healthy control subjects (n = 42), patients with stroke with intracranial atherosclerosis (ICAS) (n = 46), and patients with stroke mixed with the existing controls (n = 69). We trained and tested 70% and 30% of each study cohort, respectively, incorporating spatial coordinates and geometric vessel feature vectors. Cerebral arterial images were analyzed based on the 'segmentation-stacking' method using magnetic resonance angiography. We precisely classified the cerebral arteries across the exhaustive scope of vessel components using advanced geometric characterization, redefinition of vessel unit conception, and post-processing algorithms. We verified that the neural network ensemble, with multiple joint models as the combined predictor, classified all vessel component types independent of inter-subject variations in cerebral arterial anatomy. The validity of the categorization performance of the model was tested, considering the control, ICAS, and control-blended stroke cohorts, using the area under the receiver operating characteristic (ROC) curve and precision-recall curve. The classification accuracy rarely fell outside each image's 90-99% scope, independent of cohort-dependent cerebrovascular structural variations. The classification ensemble was calibrated with high overall area rates under the ROC curve of 0.99-1.00 [0.97-1.00] in the test set across various study cohorts. Identifying an all-inclusive range of vessel components across controls, ICAS, and stroke patients, the accuracy rates of the prediction were: internal carotid arteries, 91-100%; middle cerebral arteries, 82-98%; anterior cerebral arteries, 88-100%; posterior cerebral arteries, 87-100%; and collections of superior, anterior inferior, and posterior inferior cerebellar arteries, 90-99% in the chunk-level classification. Using a voting algorithm on the queued classified vessel factors and anatomically post-processing the automatically classified results intensified quantitative prediction performance. We employed stochastic clustering and deep neural network ensembles. Ma-chine intelligence-assisted prediction of vessel structure allowed us to personalize quantitative predictions of various types of cerebral arterial structures, contributing to precise and efficient decisions regarding the cerebrovascular disease.

Authors

  • Suk-Woo Hong
    Department of Neurology and Stroke Center, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, 06351, Korea.
  • Ha-Na Song
    Department of Neurology (J.-E.L., I.Y., H.-N.S., I.-Y.B., J.-W.C., O.Y.B., G.-M.K., W.-K.S.), Samsung Medical Center, Sungkyunkwan University School of Medicine, Republic of Korea.
  • Jong-Un Choi
    Department of Neurology and Stroke Center, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, 06351, Korea.
  • Hwan-Ho Cho
    Department of Electrical and Computer Engineering, Sungkyunkwan University, Suwon, Republic of Korea.
  • In-Young Baek
    Department of Neurology (J.-E.L., I.Y., H.-N.S., I.-Y.B., J.-W.C., O.Y.B., G.-M.K., W.-K.S.), Samsung Medical Center, Sungkyunkwan University School of Medicine, Republic of Korea.
  • Ji-Eun Lee
    Department of Neurology (J.-E.L., I.Y., H.-N.S., I.-Y.B., J.-W.C., O.Y.B., G.-M.K., W.-K.S.), Samsung Medical Center, Sungkyunkwan University School of Medicine, Republic of Korea.
  • Yoon-Chul Kim
    Clinical Research Institute Samsung Medical Center Sungkyunkwan University School of Medicine Seoul Republic of Korea.
  • Darda Chung
    Department of Neurology and Stroke Center, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, 06351, Korea.
  • Jong-Won Chung
    Department of Neurology Samsung Medical Center Sungkyunkwan University School of Medicine Seoul Republic of Korea.
  • Oh-Young Bang
    Department of Neurology and Stroke Center, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, 06351, Korea.
  • Gyeong-Moon Kim
    Department of Neurology Samsung Medical Center Sungkyunkwan University School of Medicine Seoul Republic of Korea.
  • Hyun-Jin Park
    Department of Electronic Electrical and Computer Engineering, Sungkyunkwan University, Suwon, 16419, Korea.
  • David S Liebeskind
    From the Biocomplexity Institute (V.A., R.Z.), Department of Industrial and Systems Engineering (G.T.), and Nutritional Immunology and Molecular Medicine Laboratory, Biocomplexity Institute (R.H., J.B.-R.), Virginia Tech, Blacksburg; Biomedical and Translational Informatics Institute (V.A.) and Department of Neurology (R.Z.), Geisinger Health System, Danville, PA; Department of Neurology, University of Tennessee Health Science Center, Memphis (N.G., G.T., L.E., J.E.M., A.W.A., A.V.A., R.Z.); Second Department of Neurology, "Attikon University Hospital," School of Medicine, University of Athens, Greece (N.H.); and Neurovascular Imaging Research Core and UCLA Stroke Center, University of California, Los Angeles (D.S.L.).
  • Woo-Keun Seo
    Department of Neurology Samsung Medical Center Sungkyunkwan University School of Medicine Seoul Republic of Korea.