Phenotyping urban built and natural environments with high-resolution satellite images and unsupervised deep learning.

Journal: The Science of the total environment
PMID:

Abstract

Cities in the developing world are expanding rapidly, and undergoing changes to their roads, buildings, vegetation, and other land use characteristics. Timely data are needed to ensure that urban change enhances health, wellbeing and sustainability. We present and evaluate a novel unsupervised deep clustering method to classify and characterise the complex and multidimensional built and natural environments of cities into interpretable clusters using high-resolution satellite images. We applied our approach to a high-resolution (0.3 m/pixel) satellite image of Accra, Ghana, one of the fastest growing cities in sub-Saharan Africa, and contextualised the results with demographic and environmental data that were not used for clustering. We show that clusters obtained solely from images capture distinct interpretable phenotypes of the urban natural (vegetation and water) and built (building count, size, density, and orientation; length and arrangement of roads) environment, and population, either as a unique defining characteristic (e.g., bodies of water or dense vegetation) or in combination (e.g., buildings surrounded by vegetation or sparsely populated areas intermixed with roads). Clusters that were based on a single defining characteristic were robust to the spatial scale of analysis and the choice of cluster number, whereas those based on a combination of characteristics changed based on scale and number of clusters. The results demonstrate that satellite data and unsupervised deep learning provide a cost-effective, interpretable and scalable approach for real-time tracking of sustainable urban development, especially where traditional environmental and demographic data are limited and infrequent.

Authors

  • A Barbara Metzler
    Department of Epidemiology and Biostatistics, School of Public Health, Imperial College London, London, UK.
  • Ricky Nathvani
    Department of Epidemiology and Biostatistics, School of Public Health, Imperial College London, London, UK.
  • Viktoriia Sharmanska
    Department of Informatics, University of Sussex, UK; Department of Computing, Imperial College London, London, UK.
  • Wenjia Bai
    Department of Computing Imperial College London London UK.
  • Emily Muller
    Department of Mathematical Sciences, Stellenbosch University, Stellenbosch, South Africa; African Institute Or Mathematical Sciences, Cape Town, South Africa. Electronic address: emily@aims.ac.za.
  • Simon Moulds
    Department of Civil and Environmental Engineering, Imperial College London, London, UK.
  • Charles Agyei-Asabere
    Regional Institute for Population Studies, University of Ghana, Accra, Ghana.
  • Dina Adjei-Boadi
    Department of Geography and Resource Development, University of Ghana, Legon, Accra, Ghana.
  • Elvis Kyere-Gyeabour
    Department of Geography and Resource Development, University of Ghana, Legon, Accra, Ghana.
  • Jacob Doku Tetteh
    Department of Geography and Resource Development, University of Ghana, Legon, Accra, Ghana.
  • George Owusu
    Institute of Statistical, Social and Economic Research, University of Ghana, Accra, Ghana.
  • Samuel Agyei-Mensah
    Department of Geography and Resource Development, University of Ghana, Accra, Ghana.
  • Jill Baumgartner
    Department of Equity, Ethics and Policy, School of Population and Global Health, McGill University, Montreal, Canada.
  • Brian E Robinson
    Department of Geography, McGill University, Montreal, Québec, Canada.
  • Raphael E Arku
    Department of Environmental Health Sciences, School of Public Health and Health Sciences, University of Massachusetts, Amherst, USA. rarku@umass.edu.
  • Majid Ezzati
    School of Public Health, Imperial College London, London, UK.